DRSC/TRiP Functional Genomics Resources

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Protein Alignment porin and AT5G37610

DIOPT Version :10

Sequence 1:NP_476813.1 Gene:porin / 34500 FlyBaseID:FBgn0004363 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_198577.1 Gene:AT5G37610 / 833739 AraportID:AT5G37610 Length:163 Species:Arabidopsis thaliana


Alignment Length:150 Identity:35/150 - (23%)
Similarity:65/150 - (43%) Gaps:8/150 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 PLINASAVLGYQGWLAGYQTAFDTQQSKLTTNNFALGYTTKDFVLHTAVN-DGQEFSGSIFQRTS 198
            |:::.|||.|...|..|::...|.....:|..|..|...|:|.....::: ....|:.|.:||..
plant    18 PILSFSAVFGNDFWRFGFELTLDLVNRIITKANTVLSLITEDTTTTFSIDKKASLFTASYYQRLH 82

  Fly   199 DKLDVGVQLSWASGTSNTKFAIGAKYQLDDDASVRA--KVNNASQVGLGYQQKLRDGVTL-TLST 260
            .|...|.:..:.....:..|:||.::...||..::|  .|:|...:.:.:|...    || :..|
plant    83 SKTVCGAEAKYILSDKSNSFSIGKRHLFGDDDLIQALLSVSNGGSMRVLFQHHW----TLKSFFT 143

  Fly   261 LVDGKNFNAGGHKIGVGLEL 280
            :...:..|....:.|:.:||
plant   144 IAGERLLNHSSQRFGLAVEL 163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
porinNP_476813.1 Porin3_VDAC 3..281 CDD:132767 34/149 (23%)
AT5G37610NP_198577.1 Porin_3 <6..158 CDD:460220 32/143 (22%)

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