DRSC/TRiP Functional Genomics Resources

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Protein Alignment porin and CG17139

DIOPT Version :10

Sequence 1:NP_476813.1 Gene:porin / 34500 FlyBaseID:FBgn0004363 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_001033898.1 Gene:CG17139 / 34497 FlyBaseID:FBgn0260454 Length:340 Species:Drosophila melanogaster


Alignment Length:283 Identity:72/283 - (25%)
Similarity:123/283 - (43%) Gaps:22/283 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PSYSDLGKQARDIFSKGYNFGLWKLDLKTKTSSGIEFNTAGHSNQESGKVFGSLETKYKVKDYGL 68
            |||..:|..|:.....||..|.|||...:||......::.|........|:|.||...:..::..
  Fly    62 PSYFHVGLLAKMCLIHGYTIGRWKLQCTSKTEKDFYLSSFGEGYPTWNTVYGGLEAYKESGNFHA 126

  Fly    69 TLTEKWNTDNTLFTEVAVQDQLLEG-----LKLSLEGNFAPQSGNKNGKFKVAYGHENVKADSDV 128
            :|.  |.:|..|.:::.|....|.|     ||..:.   .|:......|.|..:.....|.:..:
  Fly   127 SLA--WLSDGDLLSDLGVHGDGLGGTWSTVLKSMVS---YPEGRKFQCKLKCGFDRNPGKVEMYI 186

  Fly   129 NIDLKGPLINASAVLGY------QGWLAGYQTAFDTQQSKLTTNNFALGYTTKDFVLHTAVNDGQ 187
            .| .|.||:     :||      :.:|.||:|.|:.:......:.|..||:.....:.....:.:
  Fly   187 PI-YKEPLL-----MGYIMMQPVKNYLLGYRTVFNVEDRDFNMHAFCGGYSNDVTEVGLKFENFK 245

  Fly   188 EFSGSIFQRTSDKLDVGVQLSWASGTSNTKFAIGAKYQLDDDASVRAKVNNASQVGLGYQQKLRD 252
            ...||||||..:|..|.::.:.....|....:||.:|:.:..:.::|||...|::||.:|:|||:
  Fly   246 ALRGSIFQRIGEKWAVALKANLYGNVSAKSVSIGGQYEWEPGSMLKAKVRGDSRIGLIFQKKLRE 310

  Fly   253 GVTLTLSTLVDGKNFNAGGHKIG 275
            .:.:......:|.:...|.||.|
  Fly   311 DIEVLFHVGFEGSDPINGKHKFG 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
porinNP_476813.1 Porin3_VDAC 3..281 CDD:132767 72/283 (25%)
CG17139NP_001033898.1 Porin3_VDAC 63..339 CDD:132767 71/282 (25%)

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