DRSC/TRiP Functional Genomics Resources

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Protein Alignment porin and por1

DIOPT Version :10

Sequence 1:NP_476813.1 Gene:porin / 34500 FlyBaseID:FBgn0004363 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_001342966.1 Gene:por1 / 2542750 PomBaseID:SPAC1635.01 Length:282 Species:Schizosaccharomyces pombe


Alignment Length:286 Identity:86/286 - (30%)
Similarity:145/286 - (50%) Gaps:8/286 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAPPSYSDLGKQARDIFSKGYNFGLWKLDLKTKTSSGIEFNTAGHSNQES-GKVFGSLETKYKVK 64
            ||||:|:.:.|...|:..:.:..|...|.::|...:|:.||.:|  ||:: |.:.|.|||.:..|
pombe     1 MAPPAYAAINKLCNDLLQRDFPVGATLLSVRTTAPNGVVFNVSG--NQDAKGVISGKLETSFNDK 63

  Fly    65 DYGLTLTEKWNTDNTLFTEVAVQDQLLEGLKLSLEGNFAPQSGNKNGKFKVAYGHENVKADSDVN 129
            ..|||:::.|.|.|.|.::|.:.:|...||.|::...|:|.:..|.....:.:.|..:...:.||
pombe    64 ANGLTISQGWTTANVLESKVGLSEQFAPGLHLNVNTTFSPATAAKTAILNLEHQHPLIHTHASVN 128

  Fly   130 IDLKGPLINASAVLGYQGWLAGYQTAFDTQQSKLTTNNFALGYTTKDF-VLHTAVNDGQEFSGSI 193
            . |:...:....| |::|:|||.:..:|.|:..::.....:||..... |...|.|:...|..|.
pombe   129 A-LERKFLGDFTV-GHEGFLAGAEFGYDVQKGNVSNYAATIGYLASPLSVALQASNNLSVFRASY 191

  Fly   194 FQRTSDKLDVGVQLSW-ASGTSNT-KFAIGAKYQLDDDASVRAKVNNASQVGLGYQQKLRDGVTL 256
            :.|.|..::.|..::| |:.|:|. ...:.:||.||.|..|:.|:|:|....|.|.|.:|.|||:
pombe   192 YHRVSSDVEAGGNVTWDAASTANAITLELASKYALDKDTFVKGKINSAGVATLSYFQTVRPGVTV 256

  Fly   257 TLSTLVDGKNFNAGGHKIGVGLELEA 282
            .|...:|.:......||.|:.|...|
pombe   257 GLGLQLDTQRLGQPAHKAGLSLAFSA 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
porinNP_476813.1 Porin3_VDAC 3..281 CDD:132767 83/281 (30%)
por1NP_001342966.1 Porin3_VDAC 3..281 CDD:132767 83/281 (30%)

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