DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha16-5 and Vha16-2

DIOPT Version :8

Sequence 1:NP_609447.1 Gene:Vha16-5 / 34482 FlyBaseID:FBgn0032294 Length:193 Species:Drosophila melanogaster
Sequence 2:NP_729707.1 Gene:Vha16-2 / 39282 FlyBaseID:FBgn0028668 Length:158 Species:Drosophila melanogaster

Alignment Length:153 Identity:94/154 (61%)
Similarity:114/154 (74%) Gaps:2/154 (1%)


  Fly    37 LDRYPPYSPFYGVMGVVFSSVLTSAGAAYGTAVSGTGIAATAVMRPELVMKSIIPVVMAGIIAIY 101
            |:..|.|:.|.|..|...:.:.|:.||:|||||||.|||..||.||:::||:|||||||||||||
  Fly     6 LNEEPSYAFFLGCTGAAVAIIFTTLGASYGTAVSGVGIAKMAVNRPDMIMKAIIPVVMAGIIAIY 70

  Fly   102 GLVVSVLLSGELAPAPKYSLPTGYVHLAAGLSVGFAGLAAGYAVGEVGEVGVRHIALQPRLFIGM 166
            |||||||::|.:  ...|::...||||.||||||..||.||.|:|..|:.|||..|.|||||:||
  Fly    71 GLVVSVLIAGSI--GDDYTMEDSYVHLGAGLSVGLPGLTAGVAIGIAGDAGVRGTAEQPRLFVGM 133

  Fly   167 ILILIFAEVLGLYGLIIGIYLYT 189
            :|||||||||.|||||:.|||||
  Fly   134 VLILIFAEVLALYGLIVAIYLYT 156

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Vha16-5NP_609447.1 ATP-synt_C 46..153 CDD:294318 62/107 (58%)
ATP-synt_C 127..187 CDD:278563 42/60 (70%)
Vha16-2NP_729707.1 PRK06558 14..158 CDD:235830 91/146 (62%)
ATP-synt_C 15..120 CDD:294318 62/107 (58%)
ATP-synt_C 94..154 CDD:278563 42/60 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 C250793109
eggNOG 1 0.900 E1_COG0636
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 200 1.000 Inparanoid score I1277
Isobase 1 0.950 0 Normalized mean entropy S170
OrthoDB 1 1.010 D1534092at2759
OrthoFinder 1 1.000 FOG0001016
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 P PTHR10263
RoundUp 00.000 Not matched by this tool.
76.940

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