DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7329 and Lipn

DIOPT Version :10

Sequence 1:NP_609425.1 Gene:CG7329 / 34457 FlyBaseID:FBgn0032271 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_001178884.1 Gene:Lipn / 499345 RGDID:1560354 Length:398 Species:Rattus norvegicus


Alignment Length:396 Identity:130/396 - (32%)
Similarity:203/396 - (51%) Gaps:52/396 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 GGFMENTYPASVIEDAHLNTIQLLEKYKHPAETHQVTTDDKYILTLHRI-------ARPGAKPVL 80
            |||.|||    |..:..:|..:::....:|:|.:.|||.|.|||.::||       ...|.:||:
  Rat    21 GGFFENT----VNPEVWMNASEIITYNGYPSEEYDVTTADGYILAINRIPHGRGQTGHAGPRPVV 81

  Fly    81 -LVHGLEDTSSTWIVMGPESGLGYFLYANGYDVWMGNVRGNRYSKGHVKLNPNTDKSYWSFSWHE 144
             :.|.|...::.|:...|...||:.|...||||||||.|||.:|:.|..|:.|.:| :|:||:.|
  Rat    82 YMQHALFADNAYWLENFPNGSLGFLLADAGYDVWMGNSRGNTWSRRHKTLSVNEEK-FWAFSFDE 145

  Fly   145 IGMYDLPAMIDGVLQKTGYQKLSYFGHSQGTTSFFVMASSRPEYNAKIHLMSALAPVAFMKHMKA 209
            :..||||.:||.::.|||.:||.:.|||.|||..|:..|:.||...:|.:..||.||...|:   
  Rat   146 MAKYDLPGIIDFIVNKTGQEKLYFIGHSLGTTIGFIAFSTMPELAQRIKMNFALGPVISFKY--- 207

  Fly   210 PLMGIARMGMNMFGDNFELFPHSEV-------------------FLNQCLSSAAMLKTCMRFYWQ 255
                    ..::| .:|.|.|.|.:                   ::..| :...:...|..|...
  Rat   208 --------PTSIF-TSFFLLPRSMIKLMFGTKGFFLEDKNAKMSYVTVC-NKKLLRPMCSEFMSL 262

  Fly   256 IVGKNREEQNMTMFPVVLGHLPGGCNIKQALHYLQMQKSDRFCQYDYESK-ENQRLYGRSTPPDY 319
            ..|.|::..||:...|.:.|.|.|.:|:..||..|:.:||.|..||:.|: ||...|.:|.||.|
  Rat   263 WAGFNKKNMNMSRLDVYMSHAPTGSSIQNILHIKQLYQSDEFRAYDWGSEAENMNHYNQSRPPLY 327

  Fly   320 RLERIKAPVALYYGSNDYLSAVEDVHRLAKVLPNVVENHLYR---KWNHMDMIWGISARRSIQPR 381
            .|..:|.|.|::.|.:|.|...:||   |::||.:.....::   :|||.|.:||:.|.:.:..:
  Rat   328 DLTAMKVPTAIWAGGHDVLVTPQDV---ARILPQITNLRYFKQFPEWNHFDFVWGLDAPQRLYSK 389

  Fly   382 ILQVMQ 387
            |:.:|:
  Rat   390 IIGLMK 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7329NP_609425.1 PLN02872 44..378 CDD:215470 120/364 (33%)
LipnNP_001178884.1 PLN02872 37..395 CDD:215470 121/374 (32%)

Return to query results.
Submit another query.