DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7329 and Lip4

DIOPT Version :10

Sequence 1:NP_609425.1 Gene:CG7329 / 34457 FlyBaseID:FBgn0032271 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_001260356.1 Gene:Lip4 / 34450 FlyBaseID:FBgn0032264 Length:448 Species:Drosophila melanogaster


Alignment Length:430 Identity:184/430 - (42%)
Similarity:256/430 - (59%) Gaps:49/430 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 CILVVLGIYTLDGSGVLGGF-------------------------------MENTYPASVIEDAH 39
            |.|:.|.:..|. ||::.|.                               :||....::.||:|
  Fly    19 CTLIALSLCLLQ-SGIVEGISLSLGDITLFNVNFKTPTFLGRSVAVDSNVRLENDVDPNIQEDSH 82

  Fly    40 LNTIQLLEKYKHPAETHQVTTDDKYILTLHRIARPGAKPVLLVHGLEDTSSTWIVMGPESGLGYF 104
            |||..|::||.:|||.|.:.|||.|||||||||||||.||||||||.|:|:||::|||..||||.
  Fly    83 LNTYSLIKKYGYPAENHTLETDDGYILTLHRIARPGATPVLLVHGLLDSSATWVMMGPNKGLGYL 147

  Fly   105 LYANGYDVWMGNVRGNRYSKGHVKLNPNTDKSYWSFSWHEIGMYDLPAMIDGVLQKTGYQKLSYF 169
            ||..||||||.|||||.||:.|||.:.:..| :|.|::||:|.:|:||.:|.:|..||..:|.|.
  Fly   148 LYDQGYDVWMANVRGNTYSRKHVKYSTHHAK-FWDFTFHEMGKHDIPATMDYILNSTGVSQLHYI 211

  Fly   170 GHSQGTTSFFVMASSRPEYNAKIHLMSALAPVAFMKHMKAPLMGI-------ARMGMNMFGDNFE 227
            ||||||..|::|||.:|||..||.||..||||||:||.::|::..       ..:.:.:.|.: |
  Fly   212 GHSQGTVVFWIMASEKPEYMDKIILMQGLAPVAFLKHCRSPVVNFLAEWHLSVSLVLKLIGVH-E 275

  Fly   228 LFPHSEVFLNQ-----CLSSAAMLKTCMRFYWQIVGKNREEQNMTMFPVVLGHLPGGCNIKQALH 287
            ..|.:| |::.     |..:....:.|....:...|.::.:.|.||.||::||.|.|.:.||..|
  Fly   276 FLPKNE-FISMFNRIICDETTITKEICSNVIFLTTGFDKLQLNETMLPVIVGHSPAGASTKQMQH 339

  Fly   288 YLQMQKSDRFCQYDYESKENQRLYGRSTPPDYRLERIKAPVALYYGSNDYLSAVEDVHRLAKVLP 352
            :.|:.:|..|.|||:....|..:||...||.|.||.::|.||||||.||:|:..|||..|.:.||
  Fly   340 FGQLNRSGGFRQYDHGWLRNHWIYGTIDPPSYHLENVRAKVALYYGQNDWLAPPEDVEMLNRKLP 404

  Fly   353 NVVENHLY--RKWNHMDMIWGISARRSIQPRILQVMQYWE 390
            ||||.:|.  :::||:|.||||.||..:..|:|::|:..|
  Fly   405 NVVEKYLVDDKEFNHLDFIWGIDARELLWDRMLEIMRNHE 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7329NP_609425.1 PLN02872 44..378 CDD:215470 165/347 (48%)
Lip4NP_001260356.1 PLN02872 88..446 CDD:215470 169/360 (47%)

Return to query results.
Submit another query.