DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trim9 and Fsd2

DIOPT Version :10

Sequence 1:NP_001188786.1 Gene:Trim9 / 34453 FlyBaseID:FBgn0051721 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_766492.2 Gene:Fsd2 / 244091 MGIID:2444310 Length:716 Species:Mus musculus


Alignment Length:642 Identity:143/642 - (22%)
Similarity:228/642 - (35%) Gaps:166/642 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   223 DACRELTHPARGPLAKHTLVKPRGAAQQRESVC------GEHEETLSQYCLSCKAPACGLCIGEL 281
            |.|::|....|     :|    .|.|.: |..|      .:.||....:|::||.|...:.....
Mouse   108 DQCQDLREAYR-----YT----HGRASE-EYECYVIPEEEDEEEPADVFCITCKTPVRTVEKDFD 162

  Fly   282 RHQAHDVQSINVTCKAQKTELSHNLQQLSEKARSTTEFIQRLKGMSDKVTESCMEFERLVHAQCE 346
            .|:.|:|..|:...:..|.|:..|:.:|.::......|...|:.:...|.|:....|:.......
Mouse   163 THKEHEVTPISKALEHAKDEVHKNMCKLEQQIIEMENFASHLEEVFITVEENFGRQEQNFECHYN 227

  Fly   347 ALIQAIHDRREYLLEAIRMDKDTKIRILKDQQSNCTGKLQQTTGLIQFCIEALKETDSAAFLQVG 411
            .:::.:..:.|..::|:...|..|:..|..|..:|...|.....|:: .:|.:...:...||:..
Mouse   228 GILETLAQKYEEKIQALGEKKREKLEALYGQLVSCGENLDACRELME-TVEEMCHEEKVEFLKDA 291

  Fly   412 SMLINRV-----TNTDMTWHQEVTNAAPRVSPIVDLTLDDAALARAIDNLNFIQMRAVKDGDERC 471
            ..:.:|:     |.||:.     .:|.|...   |.|||.:.:.:.:|.:|.|            
Mouse   292 VAMTDRLGKFLKTKTDVE-----LSAQPEFE---DQTLDFSDVEQLMDAINTI------------ 336

  Fly   472 PAAPMTPTILP-SDCSAENNSVTVAWQPPNHSFVEGYVLE---LDDGSGGEFREVY--CGKETIC 530
             .||..|.|.| :..||..:||.|.|...:...||.|.|.   :.|.|.|:.|..:  ..|||.|
Mouse   337 -PAPSAPVINPQAPNSATGSSVRVCWSLYSDDTVESYQLSYRPVQDSSSGKDRAEFTMMVKETYC 400

  Fly   531 TVDGLHFNSMYNARVKAFNSAGEGEYS-------------------------------------- 557
            :|..|..|:.|...|.|.|..|....|                                      
Mouse   401 SVTNLEPNTQYEFWVIAQNRTGPSPCSEHAVYMTAPSPPSIKTEAIRSCEEAVLICWESGNLNPV 465

  Fly   558 -----ELIGLQTAEVAWFTFDPV-----------------------LSGGAGS-----------G 583
                 |||..:|.|.:..|...|                       |:.|..|           |
Mouse   466 DSYTVELIQAETPEASGVTESVVGIPTCESLIQLQPRHSYTIYVRALNVGGTSARSEPATVHTTG 530

  Fly   584 LIFSKNN------ATVSVEGW-----EHR-----------------VALGSVGFSRGVHYWEFTI 620
            ..|..|.      .|:|.:|:     |.:                 ..:|::...||.||||..:
Mouse   531 SYFQLNKDTCHPWLTISEDGFTVVRSEKKSFRKELPPSKTQFTRCVAVMGNLIPVRGRHYWEVEV 595

  Fly   621 DNYTADTDPAFGVARIDVARNKMLGKDEKSFAM---YID-RQRSWFQHNSI-HERRVEGGITTGS 680
            ..:   .|...|||..||.:.:.||.:..|:.|   ::. |.|..|.||.: .:.|:   .....
Mouse   596 AEH---LDYTVGVACEDVPKQEDLGANSLSWCMRHTFVSKRHRYEFLHNKMTPDIRI---TVAPR 654

  Fly   681 TIGVLLDLERHTLSFLVNEMPQGSVAFR-DLYGVFYPAVSINRGVTLTMHTAMDAPK 736
            .||||||.|...|||...::.|....|. .|:...:|..|:.:...|.:...:..||
Mouse   655 KIGVLLDYENAKLSFFNVDIAQHLYTFSCQLHQFVHPCFSLEKSGCLKICNGISMPK 711

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trim9NP_001188786.1 RING-HC_TRIM9-like_C-I 2..>35 CDD:438238
Bbox1_TRIM9-like_C-I 199..244 CDD:380861 5/20 (25%)
Bbox2_TRIM9-like 255..291 CDD:380822 10/41 (24%)
CC_brat-like 298..420 CDD:475168 22/126 (17%)
FN3 472..564 CDD:238020 35/140 (25%)
SPRY_PRY_TRIM67_9 561..735 CDD:293947 53/241 (22%)
Fsd2NP_766492.2 PRK12704 174..>290 CDD:237177 21/116 (18%)
FN3 339..424 CDD:214495 30/84 (36%)
FN3 <340..>529 CDD:442628 40/188 (21%)
SPRY 532..707 CDD:470632 45/180 (25%)
Blue background indicates that the domain is not in the aligned region.

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