DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trim9 and xnf7

DIOPT Version :10

Sequence 1:NP_001188786.1 Gene:Trim9 / 34453 FlyBaseID:FBgn0051721 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_001165007.1 Gene:xnf7 / 100327256 XenbaseID:XB-GENE-6462269 Length:648 Species:Xenopus tropicalis


Alignment Length:558 Identity:119/558 - (21%)
Similarity:198/558 - (35%) Gaps:156/558 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 LTCPLCRKLVFFDDGGVRNLPTYRAMEAIVDRFCAREALRCQMCETDPKVASLICEQCEIRYCDA 224
            ||||||.:|  |.|      |...|......|.|..:|...|        :|..|.:|:....| 
 Frog   182 LTCPLCMEL--FKD------PVMVACGHNFCRSCIDKAWEGQ--------SSFACPECKESITD- 229

  Fly   225 CRELT-HPARGPLAKH----TLVKPRGAAQQRESVCGEHEETLSQYCLSCKAPACGLCIGELRHQ 284
             |:.| :.....|.|.    |.|.|.....|....|.||:|.|..||.......|.:|...|:|.
 Frog   230 -RKYTINRVLANLVKKAVCATPVTPVEKKTQPLEKCSEHDERLKLYCKDDGTLGCVICRDSLKHA 293

  Fly   285 AHDVQSINVTCKAQKTELSHNLQQLSEKARSTTEFIQRLKGMSDKVTESCMEFERLVHAQCEALI 349
            :|:...|.......:.|||..:..|....:.|.:.........|:..::..:::..:.::.|.|.
 Frog   294 SHNFLPILDAVGVYREELSAIVAPLEASLKVTEQLSSEQSEKIDQHNKNMSQYKEHITSEFEKLH 358

  Fly   350 QAIHDRREYLLEAIRMDKDTKIRILKDQQSNCTGKLQQTTGLIQFCI----EALKETDSAAFLQV 410
            ..:.:|.|.|||.::...::   :||:.::|.. |:|:....|:..|    |.:::|||.:||..
 Frog   359 AFLREREEKLLEQLKEQGES---LLKEMENNLV-KMQENQDAIKKTITLANERMEDTDSISFLMD 419

  Fly   411 GSMLINRVTNTDMTWHQEVTNAAPRVSPIVDLTLDDAALARAI------DNLNFIQMRAVKDGDE 469
            ....|::.        ||...|.        ::..:..|::.:      ..:.:|..:.:|.   
 Frog   420 IKTFIDKC--------QEQQRAV--------VSTGNTLLSKELCQGTFKGPIQYIMWKELKS--- 465

  Fly   470 RCPAAPMTPTILPSDCSAENNSVTVAWQPPNHSFVEGYVLELDDGSGGEFREVYCGKETICTVDG 534
             .....:||.:|      :.||.     .||        |.|.:|    ...|..|:..:...| 
 Frog   466 -LVVPSLTPMLL------DPNSA-----HPN--------LHLSEG----LTSVRYGENKLSLPD- 505

  Fly   535 LHFNSMYNARVKAFNSAGEGEYSELIGLQTAEVAWFTFDPVLSGGAGSGLIFSKNNATVSVEGWE 599
                   ||:          .:|:.|                                       
 Frog   506 -------NAK----------RFSQCI--------------------------------------- 514

  Fly   600 HRVALGSVGFSRGVHYWEFTIDNYTA-DTDPAFGVARIDVARNKMLGKDEKSFAMYIDRQRSWFQ 663
              :.|||.||..|.||||..:.:.|| |.    |:|.....|...:..:.|:....|     |.:
 Frog   515 --LVLGSQGFESGRHYWEVEVGDKTAWDV----GMASESSNRKGKIKLNPKNGYWAI-----WLR 568

  Fly   664 HNSIHERRVEG---GITTGS---TIGVLLDLERHTLSF 695
            :.:.: :.:|.   .:|..|   .|||.:|.|...:||
 Frog   569 NGNAY-KALESPSKALTLASHPRKIGVYVDYEGGQISF 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trim9NP_001188786.1 RING-HC_TRIM9-like_C-I 2..>35 CDD:438238
Bbox1_TRIM9-like_C-I 199..244 CDD:380861 11/49 (22%)
Bbox2_TRIM9-like 255..291 CDD:380822 12/35 (34%)
CC_brat-like 298..420 CDD:475168 27/125 (22%)
FN3 472..564 CDD:238020 17/91 (19%)
SPRY_PRY_TRIM67_9 561..735 CDD:293947 29/142 (20%)
xnf7NP_001165007.1 PLN00104 5..>155 CDD:215056
CBD_MOF_like 62..131 CDD:350847
RING-HC_TRIM7-like_C-IV 177..236 CDD:438256 21/71 (30%)
Bbox2_xNF7-like 262..300 CDD:380858 12/37 (32%)
CC_brat-like 313..433 CDD:475168 26/131 (20%)
SPRY_PRY_C-I_1 476..644 CDD:293968 44/222 (20%)
Blue background indicates that the domain is not in the aligned region.

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