DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trim9 and ftr76

DIOPT Version :10

Sequence 1:NP_001188786.1 Gene:Trim9 / 34453 FlyBaseID:FBgn0051721 Length:740 Species:Drosophila melanogaster
Sequence 2:XP_002664744.1 Gene:ftr76 / 100301512 ZFINID:ZDB-GENE-090508-15 Length:553 Species:Danio rerio


Alignment Length:673 Identity:136/673 - (20%)
Similarity:218/673 - (32%) Gaps:199/673 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 SDQDQSDKVSIFSEADSGVVCCSNTSRPVSYAGTGLLPGVGNVVAPPGAAYCLT----------- 161
            |:...|:.|..||.:    ||......||:              .|.|.:||::           
Zfish     2 SESSSSECVDQFSCS----VCLDLLKEPVT--------------IPCGHSYCMSCITDCWSLKEQ 48

  Fly   162 -----CPLCRKLVFFDDGGVRNLPTYRAMEAIVDRF------------CAREALRCQMCETDPKV 209
                 ||.||:       .....|..:....|.:..            .|..|:.|.:|.|:...
Zfish    49 GPPYRCPQCRE-------SFSQRPLLKKNTLIAEMMETLQKTTLQTPAAAATAVDCDVCTTEKNR 106

  Fly   210 ASLICEQCEIRYCDACRELTHPARGPLAKHTLVKPRGAAQQRESVCGEHEETLSQYCLSCKAPAC 274
            |...|.||...:|....:| |.......||.||.  .:...:|::|..|...|..||.......|
Zfish   107 AVKSCLQCLASFCQTHLQL-HYESPAFMKHKLVD--ASRHIQENICPSHGRPLEIYCQDDHQCIC 168

  Fly   275 GLCIGELRHQAHDVQSINVTCKAQKTELS----HNLQQLSEKARSTTEFIQRLKGMSDKVTESCM 335
            .|||.. .|:.|.|.|::.....:|.||.    ..|:.:..:.:...|..:.:|.......|:..
Zfish   169 CLCIIN-SHKTHSVVSVDSEWINKKKELEKIAVERLKLIENREKGLWELSEAVKSFKSSADEAVE 232

  Fly   336 EFERLVHAQCEALIQAIHDRREYLLEAIRMDKDTKIRILKDQQSNCTGKLQQTTGLIQFCIEALK 400
            :.|::.    ..||.::..:|..:.|.||..:.|                               
Zfish   233 KMEKVF----TELICSLEKKRSEIKEQIRAQEKT------------------------------- 262

  Fly   401 ETDSAAFLQVGSMLINRVTNTDMTWHQEVTNAAPRVSPIVD-LTLDDAALARAIDNLNFIQMRAV 464
            |||.|..|.             ...|||:|......:.|.. ||.:|             |:..:
Zfish   263 ETDRAEQLH-------------QHLHQELTQLRKTQAEIHKLLTTED-------------QIHCL 301

  Fly   465 KDGDERCPAAPMTPTILPSDCSAENNSVTVAWQPPNHSFVEGYVLELDDGSGGEFREVY---CGK 526
            |..:..|        :||:       ...|.:.|.:|       |...|.|...|||..   |.:
Zfish   302 KSCESVC--------VLPT-------FEEVPFSPHSH-------LSFKDLSISAFREALEDACRQ 344

  Fly   527 ETIC---TVDGLHFNSMYNARVKAFNSAGEGEYSELIGLQTAEVAWFTFDPVLSGGAGSGLIFSK 588
            :|..   .|..:|  ::..:..|.:|...:..|...:...||.               ..||.|:
Zfish   345 QTDAISREVSNVH--TVKPSEPKTYNDFLQYFYQPHLDPNTAH---------------KNLILSE 392

  Fly   589 NNATVSVEGWEHRV------------ALGSVGFSRGVHYWEFTIDNYTADTDPAF-GVARIDVAR 640
            .|..:|....:.:.            .|...|.: |..|||.............: |::|.....
Zfish   393 ENRRISYSDTDQQYPDHPERFAAYCNVLCKEGLT-GRCYWEVNCHGKIWAVAVCYKGISRKGNTD 456

  Fly   641 NKMLGKDEKSFAMYIDRQRSWFQHNSIHERRVEGGITTGSTIGVLLDLERHTLSF--------LV 697
            :.:||.:::|:.:...::..:|.|||   ..|...:...|.|||.||.....|||        |:
Zfish   457 DNILGYNKQSWRLSRYQKNIFFVHNS---EEVSIPVFHSSRIGVYLDHRAGILSFYSVSKTMTLI 518

  Fly   698 NEMPQGSVAFRDLYGVFYPAVSI 720
            :::   ...|.:|   .|||..:
Zfish   519 HKV---QTTFTEL---LYPAFGL 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trim9NP_001188786.1 RING-HC_TRIM9-like_C-I 2..>35 CDD:438238
Bbox1_TRIM9-like_C-I 199..244 CDD:380861 14/44 (32%)
Bbox2_TRIM9-like 255..291 CDD:380822 12/35 (34%)
CC_brat-like 298..420 CDD:475168 20/125 (16%)
FN3 472..564 CDD:238020 18/97 (19%)
SPRY_PRY_TRIM67_9 561..735 CDD:293947 38/181 (21%)
ftr76XP_002664744.1 RING_Ubox 11..78 CDD:473075 16/91 (18%)
Bbox_SF 97..144 CDD:469587 14/49 (29%)
Bbox2_TRIM16-like 148..192 CDD:380827 13/44 (30%)
COG1340 <180..292 CDD:440951 27/159 (17%)
SPRY_PRY_SNTX 368..542 CDD:294002 40/193 (21%)
Blue background indicates that the domain is not in the aligned region.

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