DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RluA-2 and pus9

DIOPT Version :10

Sequence 1:NP_609411.1 Gene:RluA-2 / 34440 FlyBaseID:FBgn0032256 Length:547 Species:Drosophila melanogaster
Sequence 2:NP_592881.1 Gene:pus9 / 2542607 PomBaseID:SPAC18B11.02C Length:394 Species:Schizosaccharomyces pombe


Alignment Length:429 Identity:161/429 - (37%)
Similarity:241/429 - (56%) Gaps:55/429 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 KRPGFSDERYDETSYYFE-NGLRKVYPYFFTFTTFAKGRWVDEKILDVFVREFRAAPPEEYERSL 176
            |||  ..:...:..|.|: :|||:|.||::.:.||||.||..:.:|:||..|||......||:::
pombe     3 KRP--KRDPLKDCEYVFKGDGLRRVPPYYYEYITFAKLRWYGKTLLEVFNTEFRDRESGYYEKAI 65

  Fly   177 EAGKLTVNSEKVPKDYKIKHNDLLANVVHRHEVPVTSQPIKIVYMDKDIVVVNKPASIPVHPCGR 241
            ..|::.||::....|..|::..::::..||||.||:.||:.||:.|:..||::|||.:||||.||
pombe    66 RNGQVKVNNQIGNVDTLIENGYIVSHHAHRHEPPVSDQPVGIVHEDESYVVIDKPAGVPVHPTGR 130

  Fly   242 YRHNTVVFILAKEHNLKNLRTIHRLDRLTSGLLLFGRTAEKARELELQIRTRQVQKEYVCRVEGR 306
            |.||||:.||.||:....|...:|||||||||:.|.::.:.|.|:.:.:.::.::||||.||.|.
pombe   131 YNHNTVLHILMKENKCSLLYPCNRLDRLTSGLMFFSKSPKAAEEMRVHMISKSLKKEYVARVIGE 195

  Fly   307 FPD-GIVECNEKIDVVSYKIGVCKVSPKGKDCKTTFKRIGEVGSDSIVLCKPLTGRMHQIRVHLQ 370
            ||: |.|.|:..:..|:..:|:.::.|.||:..|.||||...|..|:|||||||||.||:|||||
pombe   196 FPNSGEVICDAPLLTVAPTLGLNRIHPDGKEASTVFKRIAFDGHTSLVLCKPLTGRTHQLRVHLQ 260

  Fly   371 FLGYPISNDPLY-NHEVFGPLKGRGGDIGGITEEQLISNLISIHNAENWLGLEGDQIVSGEIKDV 434
            :|||||:|||:| |..|:||..|:.|:  | :.|.:|..|..|.                     
pombe   261 YLGYPIANDPIYANKRVWGPSLGKNGE--G-SNESVIMRLSEIG--------------------- 301

  Fly   435 AASTSVVEAPSVVQAPINSETEKPVISKNLEPSNDATAQIATQTCYEEPDRSFDSKKTTSDPQCS 499
                             .:||..|::..... :|:..|:...:.     |:......|  ...||
pombe   302 -----------------KTETASPLLQYEWY-TNETEAEAKARR-----DKRLGELLT--GKHCS 341

  Fly   500 ECKIN-YRDPGTKDLIMYLHAWKYKGVGWEYETELPEWA 537
            ||... |.||..::|.::|||.||:...|.|:|:||:||
pombe   342 ECGTPLYSDPSPEELGIWLHALKYESKDWSYKTQLPKWA 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RluA-2NP_609411.1 PseudoU_synth_ScRIB2 202..386 CDD:211331 94/185 (51%)
pus9NP_592881.1 rluA_subfam 39..364 CDD:161659 137/373 (37%)

Return to query results.
Submit another query.