DRSC/TRiP Functional Genomics Resources

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Protein Alignment LManII and man2b1

DIOPT Version :10

Sequence 1:NP_609408.1 Gene:LManII / 34437 FlyBaseID:FBgn0027611 Length:1080 Species:Drosophila melanogaster
Sequence 2:NP_001072469.1 Gene:man2b1 / 779924 XenbaseID:XB-GENE-958698 Length:995 Species:Xenopus tropicalis


Alignment Length:1060 Identity:447/1060 - (42%)
Similarity:610/1060 - (57%) Gaps:113/1060 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 KASQCGYQSCHPTKPNMLNVHLVAHTHDDVGWLKTVDQYYYGSETKIQKAGVQYIIDSVVEALLR 94
            :|..||.|||.......|||||:.|||:||||||||||||||:...||.||||||:||||..||.
 Frog    22 QAEGCGEQSCPQAPDGFLNVHLIPHTHNDVGWLKTVDQYYYGAHNDIQHAGVQYILDSVVSQLLH 86

  Fly    95 DPEKRFIYVESAFFFKWWKEQKPKVQEAVKMLVEQGRLEFIGGAWSMNDEATTHYQSVIDQFSWG 159
            ||.|||||||||||::|||:|...|:..|..|||:||||||.|.|||||||.|||.|:|||.:.|
 Frog    87 DPSKRFIYVESAFFWRWWKQQDELVRRDVTRLVEEGRLEFINGGWSMNDEAATHYSSIIDQMTLG 151

  Fly   160 LRLLNDTFGECGRPRVGWQIDPFGHSREMASMFAQMGFDGMFFGRLDYQDKDERLMTKNAEMIWH 224
            |:.|..|||:||||||.|.|||||||||.|.:|||||:||.||||||||||..|..||..||:|.
 Frog   152 LQFLKSTFGDCGRPRVAWHIDPFGHSREQALLFAQMGYDGFFFGRLDYQDKANREKTKQMEMLWR 216

  Fly   225 GSANLGEE-ADLFSGALYNNYQAPDGFCFDILCNDAPIIDGKHSPDNNVKERIDTFLDFAKTQSQ 288
            .|.::... ||||:|.|.|.|..|||||:|.||:|.||||.....|.|....:..||..|..|:|
 Frog   217 ASDDISPPYADLFTGVLPNGYNPPDGFCWDQLCDDTPIIDDPSVEDYNADVIVQKFLKAATQQAQ 281

  Fly   289 YYRTNNIIVTMGGDFTYQAAQVYYKNLDKLIRYGNERQANGSNINLLYSTPSCYLKSLHDAGITW 353
            .|.:::|::|||.||.|:.|.:::||:|:||:..|.:|.|||.:|:.||||||||:|||.|.:||
 Frog   282 KYLSSHIVMTMGSDFQYENAIMWFKNMDRLIKNVNMQQINGSKVNVFYSTPSCYLQSLHRANLTW 346

  Fly   354 PTKSDDFFPYASDPHAYWTGYFTSRPTLKRFERDGNHFLQVCKQLSALAPKKPEEFDPH----LT 414
            |.|.|||||||..||.:|||||||||..|.:||..|:|||||.|:.||:..:... .|:    .|
 Frog   347 PMKMDDFFPYADGPHMFWTGYFTSRPAFKGYERLSNNFLQVCNQMEALSGLEARN-GPYGQSSST 410

  Fly   415 FMRETLGIMQHHDAITGTEKEKVALDYAKRMSVAFRACGATTRNALNQLTVQSKDNVKDTSAKYV 479
            .||..:|:.|||||:|||.|:.|..||:.|:|..:.:|.....|:|:.|| .:|:|         
 Frog   411 VMRRAMGVAQHHDAVTGTAKQHVNNDYSLRLSEGWDSCQVVISNSLSSLT-GTKEN--------- 465

  Fly   480 FEFKTCALLNITSCPVSEANDRFALTLYNPLAHTVNEYVRIPVPYSNYRIIDNKGVTLESQAVPI 544
              |..|.||||:.|.|:|..:.|.:.|||||..:|...||:||....|::|.....|:.|:.|.:
 Frog   466 --FAFCNLLNISVCHVTETANNFKVYLYNPLGRSVTWTVRLPVNGHAYKVIGPNDETVPSEVVDV 528

  Fly   545 PQVLIDIKHRNSTAKYEIVFLATNIPALGYRTYYVEKLDSTE----GNTRSKALPKRTSSVTVIG 605
            ......::.:...|:.|::|.. .|||:|:.::.|.||...:    ...|.|..|.:      |.
 Frog   529 SDFTKALRFQQGGAERELIFQG-QIPAVGFSSFTVGKLSLPDRFVIKGKRGKKQPDK------IQ 586

  Fly   606 NSHIQLGFD-TNGFLSEVTADGLTRLVS----QEFLFYEGAVGNNAEFLNRSSGAYIFRPNENKI 665
            |.:.::.|| ..|.:|.:  ..|.:.:|    |.|.:|..:|||  |..::.|||||||||.:..
 Frog   587 NQYYRVDFDPETGLISGI--HNLEKKISLPLKQSFYWYNASVGN--EESSQPSGAYIFRPNNSDS 647

  Fly   666 HFATDQVEIEVYKGDLVHEVHQKFNDWISQVVRVYNKDSYAEFEWLVGPIPIDDGIGKEVITRFN 730
            ...:..|...:.:..||.||||.|:.|.|||||:|....|.|.||.|||:||.|..|||||:...
 Frog   648 VPVSQHVRSYLVQNSLVQEVHQNFSSWCSQVVRLYRDQRYIELEWTVGPVPIGDEWGKEVISLIE 712

  Fly   731 SDIASDGIFRTDSNGREMIKRKINHRDTWSVKINEAVAGNYYPITTKIDVEDDTARMAILTDRAQ 795
            :::.:||:|.||||||:::||:.:.|:||.:...|.:||||||:.::|.::....::.:||||:|
 Frog   713 TNLKTDGVFYTDSNGRQILKRRRDSRETWKLNQTEPIAGNYYPVNSRIYIKGKNTQVTVLTDRSQ 777

  Fly   796 GGSSLKDGSLELMVHRRLLKDDAFGVGEALNETE-YGDGLIARGKHHLFFGKSTDREGVSLKGIE 859
            ||||::|||||||||||||:||..||||.|.|.. .|:|::.||:|.|....:.:....     .
 Frog   778 GGSSIRDGSLELMVHRRLLRDDYRGVGEPLLENGLLGEGIVVRGRHLLLLDHADEAADT-----H 837

  Fly   860 RLTQLEKLLPTWKFFSNMEDYSADEWQTAFTNIFSGISLVLPKPVHLLTLEPWHENQLLVRFEHI 924
            |...|::.:......|:.:.....:..|. ...||.::..||:..||||......:::|:|.||.
 Frog   838 RTLALQQYMSPQVVLSSGDGIPYSQSGTP-KRKFSALNGELPQNGHLLTFAMHAADKILLRLEHP 901

  Fly   925 MENGEDASYSQPVQFNVKNVLSAFDVEGIRETTLDGNAWLDESRRLQFAPDPEEAAFNTYATFSQ 989
            .::.|..:.|||:..|:..:.|:..:....||||..|......:|||:.              ::
 Frog   902 FQSQESKNNSQPITINLNTLFSSVSLSNFEETTLGANMEKSRLKRLQWR--------------TR 952

  Fly   990 PAESVHLLSAEKPMLGVKYADEALPAGQLGAESNRIRRETETRQEKKDEGRSSKSTEGPYNSFKS 1054
            ....:.:.|...|::                                                  
 Frog   953 TGSPLQMDSPRAPVV-------------------------------------------------- 967

  Fly  1055 DSSNQEYIIELSPMEIRTFI 1074
            |.||    |.|||||||||:
 Frog   968 DPSN----ITLSPMEIRTFL 983

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LManIINP_609408.1 PLN02701 47..823 CDD:178304 386/789 (49%)
GH38N_AMII_LAM_like 47..323 CDD:212121 168/276 (61%)
man2b1NP_001072469.1 PLN02701 39..987 CDD:178304 441/1043 (42%)
GH38N_AMII_LAM_like 39..317 CDD:212121 168/277 (61%)

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