DRSC/TRiP Functional Genomics Resources

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Protein Alignment LManII and man2b1

DIOPT Version :10

Sequence 1:NP_609408.1 Gene:LManII / 34437 FlyBaseID:FBgn0027611 Length:1080 Species:Drosophila melanogaster
Sequence 2:XP_005169420.1 Gene:man2b1 / 541519 ZFINID:ZDB-GENE-050327-52 Length:984 Species:Danio rerio


Alignment Length:1061 Identity:473/1061 - (44%)
Similarity:629/1061 - (59%) Gaps:127/1061 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 SQCGYQSCHPTKPNMLNVHLVAHTHDDVGWLKTVDQYYYGSETKIQKAGVQYIIDSVVEALLRDP 96
            |.|||:||..|||:|||||||.|||||||||||||||:||....||.||||||:|||::.|.:||
Zfish    29 SICGYKSCPATKPSMLNVHLVPHTHDDVGWLKTVDQYFYGDRNNIQHAGVQYILDSVIDQLQKDP 93

  Fly    97 EKRFIYVESAFFFKWWKEQKPKVQEAVKMLVEQGRLEFIGGAWSMNDEATTHYQSVIDQFSWGLR 161
            .:||||||:|||::||::|....:..|..||.:||||||.|.|.|:|||||||.:||||.:.|||
Zfish    94 ARRFIYVETAFFYRWWRQQNQNTRRIVTQLVNEGRLEFINGGWCMSDEATTHYSAVIDQMTLGLR 158

  Fly   162 LLNDTFGECGRPRVGWQIDPFGHSREMASMFAQMGFDGMFFGRLDYQDKDERLMTKNAEMIWHGS 226
            .|||||||||||||.|.||||||:||.||:|||||:||.|||||||||||.|:.||..||:|..|
Zfish   159 FLNDTFGECGRPRVAWHIDPFGHAREHASIFAQMGYDGFFFGRLDYQDKDRRMKTKEMEMLWRAS 223

  Fly   227 ANLGEE-ADLFSGALYNNYQAPDGFCFDILCNDAPIIDGKHSPDNNVKERIDTFLDFAKTQSQYY 290
            .:|... ||||:|.|.|.|..|:|||:|..|:||||.|.....|.||.|.:..||:.:..|:.||
Zfish   224 ESLTPPIADLFTGVLPNGYNPPEGFCWDQSCDDAPIRDDPDLEDYNVDEIVQKFLNASHKQADYY 288

  Fly   291 RTNNIIVTMGGDFTYQAAQVYYKNLDKLIRYGNERQANGSNINLLYSTPSCYLKSLHDAGITWPT 355
            :||:||:|||.||.|:.|.::|||:||||:|.|..||.||.:|:|||||||||:.|:.|..|||.
Zfish   289 KTNHIIMTMGSDFQYENANLWYKNMDKLIKYVNALQAKGSKLNVLYSTPSCYLQELNLANFTWPM 353

  Fly   356 KSDDFFPYASDPHAYWTGYFTSRPTLKRFERDGNHFLQVCKQLSAL-------APKKPEEFDPHL 413
            |:|||||||.|.|.:|||||||||.||.:||..|..||.|.||..|       .|....:.|.  
Zfish   354 KTDDFFPYADDAHDFWTGYFTSRPALKLYERLSNSRLQTCNQLEVLGGPTSTSGPFGEGDSDT-- 416

  Fly   414 TFMRETLGIMQHHDAITGTEKEKVALDYAKRMSVAFRACGATTRNALNQLTVQSKDNVKDTSAKY 478
              ||..:|:.|||||::||||:.||.|||:|::..:..|.....|:|..|:        .:.|..
Zfish   417 --MRRAMGVAQHHDAVSGTEKQHVANDYARRLATGWAHCEVLVSNSLAVLS--------GSEAPR 471

  Fly   479 VFEFKTCALLNITSCPVSEANDRFALTLYNPLAHTVNEYVRIPVPYSNYRIIDNKGVTLESQAVP 543
            ||    |..|||:.||::|::.:|::.:||||..||...||:||..|.|.:.|..|..::|:.:|
Zfish   472 VF----CENLNISVCPLTESSHKFSMNVYNPLGRTVRWPVRLPVNGSVYNVTDANGKAVDSEVIP 532

  Fly   544 IPQVLIDIKHRNSTAKYEIVFLATNIPALGYRTYYVEKLDSTEGNTRSK-ALPKRTSSVTVIGNS 607
            :.:...:::.....||.|:|| ....|.|||.||.:..:......:||| |:|      :.|.|.
Zfish   533 LSKSRKEVRQNRGFAKSELVF-QVEAPPLGYSTYIISMVQDQPPVSRSKNAVP------SSIQNK 590

  Fly   608 HIQLGFD-TNGFLSEVT--ADGLTRLVSQEFLFYEGAVGNNAEFLNRSSGAYIFRPNENKIHFAT 669
            .:::.|| |.|.||.:|  ....|..::|.|.:|..:.|||.| .::.|||||||||.:.....:
Zfish   591 FLKVTFDSTTGLLSSLTNLETQQTIRLTQNFFWYNASAGNNKE-SHQPSGAYIFRPNSSDPFIIS 654

  Fly   670 DQVEIE---VYKGDLVHEVHQKFNDWISQVVRVYNKDSYAEFEWLVGPIPIDDGIGKEVITRFNS 731
            ...||:   :|..  |.||.|:|:.|:|||||:|......|.||.|||:|::||:|||||||.::
Zfish   655 KTAEIQAVSLYNS--VQEVTQRFSPWVSQVVRLYEDRRELELEWTVGPVPVEDGLGKEVITRLDT 717

  Fly   732 DIASDGIFRTDSNGREMIKRKINHRDTWSVKINEAVAGNYYPITTKIDVEDDTARMAILTDRAQG 796
            ||.|.|.|.|||||||:::|:.::|.||.:|..|.:|||||||.::..::||..::.::|||:||
Zfish   718 DIQSSGYFYTDSNGREVLERRKDYRPTWDLKQTEPIAGNYYPINSRAYIKDDKRQLTVVTDRSQG 782

  Fly   797 GSSLKDGSLELMVHRRLLKDDAFGVGEALNET-EYGDGLIARGKHHLFFGKSTDREGVSLKGIER 860
            .||:.:||||:|:|||||.||..||||.|:|. |:..||:|||:  |....|.......|.  ..
Zfish   783 ASSIYNGSLEIMLHRRLLYDDFRGVGEPLSEPGEFAHGLVARGR--LLLTLSPPEAAADLH--RP 843

  Fly   861 LTQLEKLLPTWKFFSNMEDYSADEWQTAFTNI-FSGISLVLPKPVHLLTLEPWHENQLLVRFEHI 924
            |.|...|.|...|        .|...:..|.: |||:...||..|||||:..|.::.:|||.||.
Zfish   844 LAQSMVLQPLLSF--------QDGAPSPGTKLEFSGLQAALPPAVHLLTVSQWDQDSVLVRLEHQ 900

  Fly   925 MENGEDASYSQPVQFNVKNVLSAFDVEGIRETTLDGNAWLDESRRLQFAPDPEEAAFNTYATFSQ 989
            .:..|..::||||..|::.:.|...|.|..|.:|..|.|.::..||.         :||      
Zfish   901 YQAKESKTHSQPVTVNLQKLFSTLQVLGASEMSLGANQWKEDMIRLH---------WNT------ 950

  Fly   990 PAESVHLLSAEKPMLGVKYADEALPAGQLGAESNRIRRETETRQEKKDEGRSSKSTEGPYNSFKS 1054
                      ||         :|||                      ...|...|.|        
Zfish   951 ----------EK---------DALP----------------------PTARDPSSWE-------- 966

  Fly  1055 DSSNQEYIIELSPMEIRTFIV 1075
                    :.|.|||||||::
Zfish   967 --------VTLKPMEIRTFLL 979

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LManIINP_609408.1 PLN02701 47..823 CDD:178304 394/790 (50%)
GH38N_AMII_LAM_like 47..323 CDD:212121 172/276 (62%)
man2b1XP_005169420.1 PLN02701 44..982 CDD:178304 463/1046 (44%)
GH38N_AMII_LAM_like 44..322 CDD:212121 172/277 (62%)

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