DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment LManII and LOC4578274

DIOPT Version :10

Sequence 1:NP_609408.1 Gene:LManII / 34437 FlyBaseID:FBgn0027611 Length:1080 Species:Drosophila melanogaster
Sequence 2:XP_557728.4 Gene:LOC4578274 / 4578274 VectorBaseID:AGAMI1_005908 Length:1005 Species:Anopheles gambiae


Alignment Length:1068 Identity:589/1068 - (55%)
Similarity:741/1068 - (69%) Gaps:78/1068 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LVFFCALGCLIHDADLRSIQPKASQCGYQSCHPTKPNMLNVHLVAHTHDDVGWLKTVDQYYYGSE 73
            :||........:.|..:|...|...|||::|...|..|:|||||.|:|||||||||||||||||.
Mosquito    12 IVFGVIFAASANPAWHKSGHRKHHGCGYEACPEPKEGMINVHLVPHSHDDVGWLKTVDQYYYGSR 76

  Fly    74 TKIQKAGVQYIIDSVVEALLRDPEKRFIYVESAFFFKWWKEQKPKVQEAVKMLVEQGRLEFIGGA 138
            ..|||||||||:||||..||:||.:||||||||||.||:.||.|.:|:.|.||||:|||||||||
Mosquito    77 NNIQKAGVQYILDSVVHELLKDPSRRFIYVESAFFQKWYLEQTPDMQQQVHMLVEEGRLEFIGGA 141

  Fly   139 WSMNDEATTHYQSVIDQFSWGLRLLNDTFGECGRPRVGWQIDPFGHSREMASMFAQMGFDGMFFG 203
            |||||||..|||||:|||:||||.||||||||||||:||||||||||||.||:|||||:||:||.
Mosquito   142 WSMNDEAAVHYQSVVDQFTWGLRFLNDTFGECGRPRIGWQIDPFGHSREQASLFAQMGYDGLFFA 206

  Fly   204 RLDYQDKDERLMTKNAEMIWHGSANLGEEADLFSGALYNNYQAPDGFCFDILCNDAPIIDGKHSP 268
            |||||||:.|:.|:..|||||.|::| ||.:||:..|||:|.||.|:|||:||||.|:||.:.|.
Mosquito   207 RLDYQDKNNRMQTRTPEMIWHTSSSL-EENELFTSVLYNHYSAPPGYCFDVLCNDDPMIDDQEST 270

  Fly   269 DNNVKERIDTFLDFAKTQSQYYRTNNIIVTMGGDFTYQAAQVYYKNLDKLIRYGNERQANGSNIN 333
            |.|||.|||||:.:.:..:..|||||:|:|||.||.|..|.:.:||:||||:|.||||:.||.||
Mosquito   271 DYNVKARIDTFIAWLEKMAGSYRTNNLILTMGDDFNYMNAVMNFKNMDKLIKYTNERQSEGSKIN 335

  Fly   334 LLYSTPSCYLKSLHDAGITWPTKSDDFFPYASDPHAYWTGYFTSRPTLKRFERDGNHFLQVCKQL 398
            ..|||||||:|::|.|.|.|||||||||||.||.|::||||||||||.||:||:|||||||||||
Mosquito   336 AFYSTPSCYVKAVHGADIEWPTKSDDFFPYESDYHSFWTGYFTSRPTQKRYEREGNHFLQVCKQL 400

  Fly   399 SALAPKKPEEFDPHLTFMRETLGIMQHHDAITGTEKEKVALDYAKRMSVAFRACGATTRNALNQL 463
            ||:||.|...::.|||.:||.:|:||||||||||||:.||.|||:::..||.||.|.||:|||||
Mosquito   401 SAIAPMKESFYESHLTALREVMGVMQHHDAITGTEKQHVADDYARKLYEAFEACSANTRSALNQL 465

  Fly   464 TVQSKDNVKDTSAKYVFEFKTCALLNITSCPVSEANDRFALTLYNPLAHTVNEYVRIPVPYSNYR 528
            |.: :|:.|       |::..|...|::.|.::|::|...:.|||||.|:.|::||:||...||.
Mosquito   466 TGE-RDSFK-------FDWGYCKQANVSDCAMTESSDNLVVLLYNPLGHSSNDFVRLPVKEGNYL 522

  Fly   529 IIDNKGVTLESQAVPIPQVLIDIKHRNSTAKYEIVFLATNIPALGYRTYYVEKLDSTEGNTRSKA 593
            :.:::|.|:.|..:|||..:||:..|.|.|.:|:||....:..:||::|||.|   .|..:.|.|
Mosquito   523 VRNDRGQTVRSTLIPIPGSVIDLPFRESEATHELVFQGEQVAPVGYKSYYVSK---EESKSSSFA 584

  Fly   594 LPKRTSSVTVIGNSHIQLGFDTNGFLSEVTADGLTRLVSQEFLFYEGAVGNNAEFLNRSSGAYIF 658
            ...|......|||.|:.:.||.|||:|::|.||.|..:.|.||:||||.|||.||.|||||||||
Mosquito   585 AVMRQEDNVSIGNDHLTVHFDENGFMSQITIDGETHPLKQNFLYYEGAYGNNEEFRNRSSGAYIF 649

  Fly   659 RPNENKIHFATDQVEIEVYKGDLVHEVHQKFNDWISQVVRVYNKDSYAEFEWLVGPIPIDDGIGK 723
            |||..: ...||.|||:|.|.|||.||||.||:|||||:|||....:.|.|||||||||||..||
Mosquito   650 RPNGTE-KAVTDVVEIQVVKSDLVQEVHQIFNEWISQVIRVYAGQEHVELEWLVGPIPIDDSKGK 713

  Fly   724 EVITRFNSDIASDGIFRTDSNGREMIKRKINHRDTWSVKINEAVAGNYYPITTKIDVEDDTARMA 788
            |:|:||.|||.|:|.|.||||||||::|..|:|:||.:.:.|.|||||||||.||.||||.:|||
Mosquito   714 EIISRFESDIKSEGTFWTDSNGREMLRRVRNYRETWELDLVEPVAGNYYPITAKIAVEDDHSRMA 778

  Fly   789 ILTDRAQGGSSLKDGSLELMVHRRLLKDDAFGVGEALNETEYGDGLIARGKHHLFFGKSTDREGV 853
            :|.|||||||||.||.||||||||||:|||||||||||||:||.|::|||||.||||.|......
Mosquito   779 VLNDRAQGGSSLVDGQLELMVHRRLLRDDAFGVGEALNETQYGAGIVARGKHWLFFGSSQKAVSP 843

  Fly   854 SLKGIERLTQLEKLLPTWKFFSNMED-YSADEWQTAFTNIFSGISLVLPKPVHLLTLEPWHENQL 917
            :|:..||..|.:.|||:|.|.|.::: .:.|::.:.|.||:|.|:..||..|:|||||||.:..:
Mosquito   844 TLQAKERFLQNKVLLPSWPFVSAVDNVLTYDDYLSNFRNIYSAIAQQLPPNVNLLTLEPWKDGTV 908

  Fly   918 LVRFEHIMENGEDASYSQPVQFNVKNVLSAFDVEGIRETTLDGNAWLDESRRLQFAPDPEEAAFN 982
            |||.||:.|..||..|||.|:.||::||.|.::|.|.||||..|.|..:|:|||         ||
Mosquito   909 LVRLEHLFERNEDPVYSQAVRINVRSVLFALNIESIHETTLAANQWKADSKRLQ---------FN 964

  Fly   983 TYATFSQPAESVHLLSAEKPMLGVKYADEALPAGQLGAESNRIRRETETRQEKKDEGRSSKSTEG 1047
            |.:|                      |:||.|..|:    .|:.::                   
Mosquito   965 TEST----------------------ANEASPKDQV----ERVAQD------------------- 984

  Fly  1048 PYNSFKSDSSNQEYIIELSPMEIRTFIV 1075
                      :.::.|||.|||||||||
Mosquito   985 ----------STDFDIELQPMEIRTFIV 1002

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LManIINP_609408.1 PLN02701 47..823 CDD:178304 481/775 (62%)
GH38N_AMII_LAM_like 47..323 CDD:212121 191/275 (69%)
LOC4578274XP_557728.4 None

Return to query results.
Submit another query.