DRSC/TRiP Functional Genomics Resources

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Protein Alignment LManII and alpha-Man-IIb

DIOPT Version :10

Sequence 1:NP_609408.1 Gene:LManII / 34437 FlyBaseID:FBgn0027611 Length:1080 Species:Drosophila melanogaster
Sequence 2:NP_650494.2 Gene:alpha-Man-IIb / 41913 FlyBaseID:FBgn0026616 Length:1249 Species:Drosophila melanogaster


Alignment Length:1220 Identity:290/1220 - (23%)
Similarity:468/1220 - (38%) Gaps:339/1220 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 LNVHLVAHTHDDVGWLKTVDQYYYGSETKIQKAGVQYIIDSVVEALLRDPEKRFIYVESAFFFKW 111
            |.:.:|.|:|:|.|||||...|:        ::..:.|::.:|..:....:..||:.|.:|...|
  Fly   168 LKIIVVPHSHNDPGWLKTFTNYF--------QSDSRQILNLLVTKMQEYTDMTFIWSEISFLQLW 224

  Fly   112 WKEQKPKVQEAVKMLVEQGRLEFIGGAWSMNDEATTHYQSVIDQF----SWGLRLLNDTFGECGR 172
            |.:..|..|.|:|.|::.||:|...|.|.|.|||..|...::||.    .|....||.|      
  Fly   225 WDQAHPTKQRALKRLIDAGRIEITTGGWVMTDEANVHIYPMLDQLIEGHQWLKNNLNVT------ 283

  Fly   173 PRVGWQIDPFGHSREMASMFAQMGFDGMFFGRLDYQDKDERLMTKNAEMIWHGSANLGEEADLFS 237
            |:|||.||||||...:..:.:...|:|....|:.|..|......::.:.||.......::.|..:
  Fly   284 PKVGWSIDPFGHGSTVPYLLSGANFEGTIIQRIHYAWKQWFARQQSGDFIWKPYWRSRKDKDSEA 348

  Fly   238 GALYNNYQAPDGFCFDILCNDAPII----DGKHSP--------------DNNVKERIDTFLD-FA 283
            |:|..:....|.:.....|...|.|    |.:..|              |:|::.:....|: :|
  Fly   349 GSLLTHNMPFDIYSIKGSCGPHPFICLNFDFRKIPGEYTEYSVKAQFITDDNLESKAQLLLEQYA 413

  Fly   284 KTQSQYYRTNNIIVTMGGDFTY---QAAQVYYKNLDKLIRY--GNERQANGSNINLLYSTPSCYL 343
            :|.| .:..|..::.:|.||.|   :.....|:|..|||.:  .|.|..|.   ::.:.|||.|.
  Fly   414 RTAS-LFPHNVALIPVGDDFRYNKDREVDQQYQNYKKLIDHIMANRRLYNA---DIRFGTPSDYF 474

  Fly   344 KSL------HDAGITWPTKSDDFFPY----ASDPHAYWTGYFTSRPTLKRFERDGNHFLQVCKQL 398
            :::      |..|  :||...|||.|    :....|||:||||:||..|....:..|.|:..:.:
  Fly   475 EAIKERMKDHTPG--FPTFKGDFFVYSDIFSEGRPAYWSGYFTTRPFYKLLSSELEHQLRSAEIV 537

  Fly   399 SALAPKKPEE---------FDPHLTFM---RETLGIMQHHDAITGTEKEKVALDYAKRMSVAFRA 451
            ..||.....:         ::.:...:   |..||:.|||||||||.|..|..|||.|:.     
  Fly   538 FTLAYNTARQAKRENAIKIYEKNYELIINARRNLGLFQHHDAITGTSKAAVMRDYAMRLF----- 597

  Fly   452 CGATTRNALN------QLTVQ--------------SKDNVKDTSAKYVFEFKTCALLNITSCPVS 496
              .:|:|.:.      :|.:|              .:||......|...:...    ...|.|..
  Fly   598 --ESTQNMVKMQESCLELLLQKGQPRHHGFLLSEFERDNFNKLPRKMPIQMAN----GDESTPTV 656

  Fly   497 EANDRFA-----------LTLYNPLAHTVNEYVRIPVPYSNYRIIDNKGVTLES-QAVPIPQVLI 549
            .|.:..|           ..|||.||....|.|.:.|.:.|.:|:::|||.|.. |..|:..:..
  Fly   657 PAGEGGAGGSSSSGSVGSFVLYNSLAQKRLEVVTLRVQHPNVKIVNDKGVELNHIQINPVWNITD 721

  Fly   550 DIKH-------------RNSTAKYEIVFLATNIPALGYRTYYVEK--------------LDSTEG 587
            ..:.             |.||.::|::|:| .:..|...||.|:.              .|.||.
  Fly   722 TYEQGLGTSVSGTVGRIRTSTRQFEVMFVA-ELEPLSLSTYRVQVDEVNFKRNIATIYCDDCTES 785

  Fly   588 NTRSKALPKRTSSVTV--------------IGNSHIQLGFD-TNGFLSEVTADG----LTRLVSQ 633
            ...|.:.|:...|...              :.|.|::|.|| .:|||..:|...    |.:.:..
  Fly   786 QPASVSPPEEIESSPTSVFEARGKPAGDIQLENPHMRLLFDEKSGFLKTITRKNQKKELLKPLQC 850

  Fly   634 EFLFYEGAVGNNAEFLNRSSGAYIFRPN------ENKIHFATDQVEIEVYKGDLVHEVHQKFNDW 692
            ...|   |...:|:|   .||||:|:.:      |.::......:.|.:..|.:..:|...:..:
  Fly   851 NIKF---AAYRSAQF---HSGAYLFKTDPEQSEAEKEVLEGYTDMRIIITSGPIASDVTVIYGPF 909

  Fly   693 ISQVVRVYNKDSYAEFEWLVGPIPIDDGIG---------KEVITRFNSDIASDG----------- 737
            ::..||::|..::     |...|.:::.|.         .|:..||.::|.:..           
  Fly   910 LAHTVRIFNTRTH-----LDAAIYVENDIDFEPPPKNRETELFMRFVTNIDNIAQAPMQRDPLKE 969

  Fly   738 -----------IFRTDSNGREMIKRKINHRDTWSVKINE-AVAGNYYPITTKIDVEDDTARMAIL 790
                       :|.:|.||.:..:|         :|:.. .:.|||:|||:...::|...|:.:|
  Fly   970 PVDAATMPELPVFYSDQNGFQYHER---------IKVPAIGIEGNYFPITSGAFIQDSRLRLTLL 1025

  Fly   791 TDRAQGGSSLKDGSLELMVHRRLLKDDAFGVGEALNETEYGDGLIARGKHHLFFGKSTDREG--- 852
            |..|||.:|.:.|.||:|:.||.|.||..|:||.:.:        :|...|.|:....|..|   
  Fly  1026 TTHAQGAASYEPGQLEVMLDRRTLYDDYRGMGEGVVD--------SRLTRHKFWLLVEDLPGGQH 1082

  Fly   853 --------VSLKGIERLTQLEKLLPTWKFFSNMEDYSADEWQTAFTNIFSGISLVLPK-----PV 904
                    |..:..::|....:..|...|.||:|       |.........:..:|||     .|
  Fly  1083 VTQPPSYKVLSQQAQQLANALRYPPNLYFVSNLE-------QPELAAALLPLVRLLPKGPLPCDV 1140

  Fly   905 HLLTLEPWHE---------NQLLVRFEHIMENGEDASYSQPVQFNVKNV--LSAFDVEGIRETTL 958
            ||.||....:         :.|||    :...|.|.|.|...:.:::.:  ||:   :|:     
  Fly  1141 HLTTLRTLSDPELQLFPSASALLV----LHRQGFDCSVSAGRELSMEAICPLSS---KGL----- 1193

  Fly   959 DGNAWLDESRRLQFAPDPEEAAFNTYATFSQPAESVHLLSAEKPMLGVKYADEALPAGQLGAESN 1023
             ||..|.   ||                      |:|.:.|.. :.|.:.        :...||.
  Fly  1194 -GNVQLG---RL----------------------SLHTIEATS-LTGTEQ--------KSSRESY 1223

  Fly  1024 RIRRETETRQEKKDEGRSSKSTEGPYNSFKSDSSNQEYIIELSPMEIRTF 1073
            .||...|                                |.|.|||:|||
  Fly  1224 HIRSLAE--------------------------------ISLEPMELRTF 1241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LManIINP_609408.1 PLN02701 47..823 CDD:178304 235/941 (25%)
GH38N_AMII_LAM_like 47..323 CDD:212121 82/303 (27%)
alpha-Man-IIbNP_650494.2 PLN02701 148..1246 CDD:178304 290/1220 (24%)

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