DRSC/TRiP Functional Genomics Resources

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Protein Alignment LManII and LManVI

DIOPT Version :10

Sequence 1:NP_609408.1 Gene:LManII / 34437 FlyBaseID:FBgn0027611 Length:1080 Species:Drosophila melanogaster
Sequence 2:NP_609253.1 Gene:LManVI / 34206 FlyBaseID:FBgn0032069 Length:1007 Species:Drosophila melanogaster


Alignment Length:1107 Identity:486/1107 - (43%)
Similarity:670/1107 - (60%) Gaps:149/1107 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LVFFCALGCLIHDADLRSIQPKASQCGYQSCHPTKPNMLNVHLVAHTHDDVGWLKTVDQYYYGSE 73
            :|.|.||..:       |::|....|||::|..||.||:|:|:|.|:|||||||||||||:||..
  Fly     7 IVLFVALLAI-------SVRPSEEACGYEACPKTKTNMINIHMVPHSHDDVGWLKTVDQYFYGHR 64

  Fly    74 TKIQKAGVQYIIDSVVEALLRDPEKRFIYVESAFFFKWWKEQKPKVQEAVKMLVEQGRLEFIGGA 138
            :.||.||||||||:|:..|::||.:|||.||::||.|||.||....::.|:.||.:|||||.|||
  Fly    65 SNIQHAGVQYIIDTVIAELIKDPARRFIQVETSFFAKWWAEQSETAKQVVRKLVNEGRLEFTGGA 129

  Fly   139 WSMNDEATTHYQSVIDQFSWGLRLLNDTFGECGRPRVGWQIDPFGHSREMASMFAQMGFDGMFFG 203
            |||||||..:||||||||:.||:.|:||||.|.|||:||||||||||||.||:|||||:||.||.
  Fly   130 WSMNDEAAVNYQSVIDQFTLGLKFLDDTFGSCARPRIGWQIDPFGHSREQASIFAQMGYDGEFFA 194

  Fly   204 RLDYQDKDERLMTKNAEMIWHGSANLGEEADLFSGALYNNYQAPDGFCFDILCNDAPIIDGKHSP 268
            |:|::||::|:.....||||..|.:|..: ::|:|.||.:|.||.|:|||:.|.|.||||.| |.
  Fly   195 RMDHRDKNDRIDNLGMEMIWDASDSLSND-EIFTGLLYRHYSAPPGYCFDVHCGDDPIIDTK-SY 257

  Fly   269 DNNVKERIDTFLDFAKTQSQYYRTNNIIVTMGGDFTYQAAQVYYKNLDKLIRYGNERQANGSNIN 333
            |||||.|:|.||.:..:.:|:||:|:|::.||.||.|:.|||.:||:||||:|.|||||.||..|
  Fly   258 DNNVKSRVDDFLSYVTSVAQHYRSNHIMIPMGDDFQYEDAQVNFKNMDKLIKYVNERQAEGSTFN 322

  Fly   334 LLYSTPSCYLKSLHDAGITWPTKSDDFFPYASDPHAYWTGYFTSRPTLKRFERDGNHFLQVCKQL 398
            |.||||:|||.|||:...|||.|:.|||||.||.::|||||||||||.|||||||||.|||.|||
  Fly   323 LFYSTPACYLNSLHEGLQTWPNKTQDFFPYGSDDNSYWTGYFTSRPTQKRFERDGNHILQVAKQL 387

  Fly   399 SALAPKKPEEFDPHLTFMRETLGIMQHHDAITGTEKEKVALDYAKRMSVAFRACGATTRNALNQL 463
            |..|....::....|.::||.:|:||||||||||||:.|:.||.:.:..|......|.|:.|.:|
  Fly   388 SVFAELNTKQQKEDLEYLREIMGVMQHHDAITGTEKQHVSDDYDRILYDAILGGVNTARDGLRKL 452

  Fly   464 TVQSKDNVKDTSAKYVFEFKTCALLNITSCPVSEAN-DRFALTLYNPLAHTVNEYVRIPVPYSNY 527
            |     |:.:.      ||::|..|||:.|..::.: |...:|||||||||..:|||:||...||
  Fly   453 T-----NLPNG------EFESCLQLNISECAFTKDDADNVVVTLYNPLAHTSTQYVRVPVKNENY 506

  Fly   528 RIIDNKGVTLESQAVPIPQVLIDIKHRNSTAKYEIVFLATNIPALGYRTYYVEKLDSTE-----G 587
            .:.|.||..:.|:.||:...::.::.||:..::|:||.| ::..:.  .||::|:.|.|     .
  Fly   507 EVTDEKGRVVASEVVPVAWQVLALEFRNNDTQHELVFKA-SVDKIA--NYYIKKVASQETKNVAA 568

  Fly   588 NTRSK----------ALPKRTSSV----------------TVIGNSHIQLGFDT-NGFLSEVTAD 625
            :|:||          .:|||...|                ||:..|.::|..|. .|.|..|..:
  Fly   569 HTKSKRSIKAEEANLEVPKRFKKVHSLKNATETFDDDEGETVVQTSQVKLVIDNKTGLLKTVEMN 633

  Fly   626 GLTRLVSQEFLFYEGAVGNNAEFLNRSSGAYIFRPNENKIHFAT-----DQVEIEVYKGDLVHEV 685
            |::..:.|.:..|.          ...||||:||    :.|.|.     :.||..||.|.||.||
  Fly   634 GVSENIDQSYGVYR----------TYDSGAYVFR----QYHQADFIVQYEGVEFTVYDGALVKEV 684

  Fly   686 HQKFNDWISQVVRVYNKDSYAEFEWLVGPIPIDDGIGKEVITRFNSDIASDGIFRTDSNGREMIK 750
            ||:|:::||||:|:|...:..|.||.||||..::..|:||:..|||.|||||:..||||||||||
  Fly   685 HQQFSEYISQVIRIYEGKNLVEIEWQVGPIEREEEFGREVVIIFNSTIASDGVSYTDSNGREMIK 749

  Fly   751 RKINHRDTWSVKIN-EAVAGNYYPITTKIDVEDDTARMAILTDRAQGGSSLKDGSLELMVHRRLL 814
            |..:.|:|::..:: :..|.||||:|::|.::|...|:|:|.||||||:|:.:|.||||:||||:
  Fly   750 RVKDQRETFTPGLDRQPTAANYYPVTSRIALQDSKKRIAVLNDRAQGGASMLNGQLELMLHRRLV 814

  Fly   815 KDDAFGVGEALNETEYGDGLIARGKHHLFFGKSTDREGVSLKGIERLTQLEKLLPTWKFFS-NME 878
            :||.:||||||||.:||..:|||||.:|....|.:....     ||..:.|..||.||||| |..
  Fly   815 RDDGYGVGEALNEEKYGQPMIARGKVYLILSPSDESTAA-----EREAEKEIHLPFWKFFSKNTG 874

  Fly   879 DYSADEWQTAFTNIFSGISLVLPKPVHLLTLEPWHENQLLVRFEHIMENGEDASYSQPVQFNVKN 943
            ..:|........|.|       ||.||||||||::::::|:|.|:.:::.|    .|.|.||::.
  Fly   875 STTAAAKSVPSFNDF-------PKSVHLLTLEPFNDDEVLLRVENFLDHTE----GQVVSFNIRP 928

  Fly   944 VLSAFDVEGIRETTLDGNAWLDESRRLQFAPDPEEAAFNTYATFSQPAESVHLLSAEKPMLGVKY 1008
            :....:...|||||||||..|.:.:|.:|..|         ::..:|....:..||.|| |..:.
  Fly   929 IFDYLNGVEIRETTLDGNLPLSDMKRFKFHHD---------SSGQKPDAVEYFTSAHKP-LAAEQ 983

  Fly  1009 ADEALPAGQLGAESNRIRRETETRQEKKDEGRSSKSTEGPYNSFKSDSSNQEYIIELSPMEIRTF 1073
            :.||                                              .|:.:.|.||:||||
  Fly   984 SQEA----------------------------------------------SEFSVTLHPMQIRTF 1002

  Fly  1074 IV 1075
            |:
  Fly  1003 II 1004

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LManIINP_609408.1 PLN02701 47..823 CDD:178304 395/814 (49%)
GH38N_AMII_LAM_like 47..323 CDD:212121 164/275 (60%)
LManVINP_609253.1 GH38N_AMII_LAM_like 38..312 CDD:212121 164/275 (60%)
PLN02701 40..898 CDD:178304 429/899 (48%)

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