DRSC/TRiP Functional Genomics Resources

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Protein Alignment LManI and LManIV

DIOPT Version :9

Sequence 1:NP_001260350.1 Gene:LManI / 34436 FlyBaseID:FBgn0032253 Length:950 Species:Drosophila melanogaster
Sequence 2:NP_609251.2 Gene:LManIV / 34204 FlyBaseID:FBgn0032067 Length:978 Species:Drosophila melanogaster


Alignment Length:951 Identity:596/951 - (62%)
Similarity:736/951 - (77%) Gaps:18/951 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MINVHLVPHSHDDVGWLKTVDQYYYGSQNKIQHAGVQYILDTVVEELLKDSSRRFIQVETFFFAK 65
            |:|:|||||||:||||||||||.|||.:|||.|||||||||:||.:||:|..||||||||.||||
  Fly    37 MVNIHLVPHSHNDVGWLKTVDQSYYGYKNKIHHAGVQYILDSVVSQLLQDPKRRFIQVETAFFAK 101

  Fly    66 WYSEQTETVQRAVKKLVAQGRLEFAGGAWSMNDEATVHYQSVVDQFNLGLRYLKDTFGDCGRPTV 130
            |::.|:|::::.|.|||.:||.||.||||||||||.|:||.|:|||.:||::|.:|||.||||.|
  Fly   102 WWNVQSESMKKVVTKLVNEGRFEFTGGAWSMNDEANVNYQGVIDQFTVGLKFLNETFGSCGRPRV 166

  Fly   131 GWQIDPFGHSREMASIFAQMAFNGEFFARMDYVDKKQRMLDLEMEMIWQSSESLKNSNIFTGMLY 195
            |||||.||||||.|:|||.|.::|:||:|||:.||..||.||.|||||.:|||:...::|:||||
  Fly   167 GWQIDTFGHSREQAAIFAHMGYDGQFFSRMDHNDKDTRMNDLTMEMIWDASESMSGVSLFSGMLY 231

  Fly   196 NHYSAPPGFCFDINCEDAPIIDGESYDNNVDARVSEFIDYVKNMSKSYRSTHIMVPMGDDFQYED 260
            |.||..|||||||.|.|.|||||:|.:|||..||.:||.|.||:|:.|.:.|||||||.||||||
  Fly   232 NFYSDTPGFCFDILCTDQPIIDGDSEENNVKQRVDDFISYAKNVSEVYITNHIMVPMGGDFQYED 296

  Fly   261 AAVNFKNMDKLIKYVNDRQSTGSQVNVFYSTPSCYLYELHQLKQTWPNKTEDFFPYSSDSHSYWT 325
            |.||:|||||||||:|:||::||:.|:|||||||||..|||..::|||||:|||||:.:.:|:||
  Fly   297 AKVNYKNMDKLIKYINERQASGSKYNIFYSTPSCYLNSLHQSLESWPNKTQDFFPYAHEKNSFWT 361

  Fly   326 GYFTSRPTQKRFHRDGNHFFQTVKQLSVLANLSGTQYSEDLDNLSQAMGIMQHHDAVTGTEKQAV 390
            |:||||||||||.|||||..|..|||||||||:..::..|||.|.|.||:||||||:||||||||
  Fly   362 GFFTSRPTQKRFERDGNHMLQVAKQLSVLANLTSEEHKIDLDYLRQVMGVMQHHDAITGTEKQAV 426

  Fly   391 ASDYDRLLFKAIVGAENSARDALRSLTNLTSGEFESCLELNISVCAFTQDTANNVIVTLVNPLAH 455
            :.||||::::|||||.|:||||||.|||:..|||||||.||||.||||:|.|:||:|||.|||||
  Fly   427 SDDYDRMMYEAIVGASNNARDALRLLTNMPYGEFESCLRLNISECAFTKDGADNVLVTLYNPLAH 491

  Fly   456 SSTQYVRVPAKNENYIVTDEKGREVFSEVVPVPWQVLALEHRPNDTQHELVFEASVDKIANFLIR 520
            |||||||:|.|.|||.|||||||.|.||||||||||||||:|.|||||||||:|:|:|::::.|:
  Fly   492 SSTQYVRIPVKEENYQVTDEKGRTVPSEVVPVPWQVLALEYRSNDTQHELVFKATVNKVSSYSIK 556

  Fly   521 VLPSP--KNIAEDQVQFPVERSQDELTVETSLVKLTFDTTTGGLKTVKMNGFTENIQQTFGIYKG 583
            .:.|.  |:.:..::. |.|.:..|..||.|:|||..|..||.||:|:|||.:|.|.|.||:||.
  Fly   557 KVESSEVKHSSIKKIN-PREDNNSETVVENSVVKLVMDNHTGRLKSVEMNGVSEKIVQNFGVYKS 620

  Fly   584 YRGNNGESKNRSSGAYVFRPYGDIEIVNNKVELSFYNGTKVKEVHQHVNEWISQVIRIYEDVNRV 648
            :          :|.||.||..||||:..|..|.:.|.|:.|||||||||:||||||||||.|:||
  Fly   621 H----------TSCAYTFRQDGDIELFENDFEFTVYEGSLVKEVHQHVNDWISQVIRIYEGVSRV 675

  Fly   649 EFEWLVGPIPTDDDVGKEIITRFSSNISSKGKFYTDSNGREILERERNQREHFTPDMS-EAISGN 712
            |.||:|||||.||.:|.|.:|.|.|.|||.|.|||||||||:::|.:::||.|..|:| :.:|||
  Fly   676 ELEWMVGPIPIDDKLGSEFVTNFKSEISSNGVFYTDSNGRELMKRVKDKREDFVSDLSRQPVSGN 740

  Fly   713 YYPVTGQISLQDDEKRITLLNDRAQGGTSLKDGELELMLHRRLLNDDAFGVGEALNETQYGTGLI 777
            :||||.:|:||||.||:.|||||:|||.||:||.||:::|||.|.:|..||||||||||||.|||
  Fly   741 FYPVTSRIALQDDTKRLVLLNDRSQGGASLEDGALEMLIHRRHLFNDGGGVGEALNETQYGKGLI 805

  Fly   778 ARGKIYLILD-AVDGKP-NQRLLQHQLDQHFWKFFSKSNGVASVNRNMIPDFFGIPESVELLSLE 840
            ||||:||||| |.||.. .:|..:.:|...|||||||:.||.......:|||..:|:||.||:||
  Fly   806 ARGKLYLILDSATDGDTVTERKTEKELFLPFWKFFSKTGGVEITPSKSLPDFNDLPQSVHLLTLE 870

  Fly   841 PYSKDQILIRLENF--NTEGNVVSFNIYPLFESLDGYQIWETTLDGNMLLEDVKRFKFAQDGTGS 903
            .:|:.:||||.|:|  .:||.|:||||..:|:||.|..|.||||||||.|.|:|||||....:|:
  Fly   871 FFSEQEILIRFEHFLDKSEGRVISFNIRDIFDSLGGLAIRETTLDGNMPLSDMKRFKFHAQESGT 935

  Fly   904 IPSSVEYYHAPHNPLTANSTMNASGFVVTLVPMQIRTFIIQ 944
            .||||||..|.|.||.|..:..||.|.|||.|||||||||:
  Fly   936 KPSSVEYSTAQHKPLEAVKSDEASLFAVTLYPMQIRTFIIK 976

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LManINP_001260350.1 GH38N_AMII_LAM_like 2..276 CDD:212121 185/273 (68%)
Alpha-mann_mid 323..398 CDD:286360 53/74 (72%)
Glyco_hydro_38C 536..941 CDD:285047 232/409 (57%)
LManIVNP_609251.2 GH38N_AMII_LAM_like 39..312 CDD:212121 185/272 (68%)
Alpha-mann_mid 359..434 CDD:214875 53/74 (72%)
Glyco_hydro_38C 483..973 CDD:285047 290/500 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450122
Domainoid 1 1.000 310 1.000 Domainoid score I311
eggNOG 1 0.900 - - E1_KOG1959
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 649 1.000 Inparanoid score I170
Isobase 1 0.950 - 0 Normalized mean entropy S4230
OMA 1 1.010 - - QHG55625
OrthoDB 1 1.010 - - D201312at2759
OrthoFinder 1 1.000 - - FOG0001724
OrthoInspector 1 1.000 - - otm24899
orthoMCL 1 0.900 - - OOG6_101099
Panther 1 1.100 - - P PTHR11607
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1279
1312.760

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