DRSC/TRiP Functional Genomics Resources

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Protein Alignment TfIIB and AT3G57370

DIOPT Version :10

Sequence 1:NP_476888.1 Gene:TfIIB / 34430 FlyBaseID:FBgn0004915 Length:315 Species:Drosophila melanogaster
Sequence 2:NP_001319778.1 Gene:AT3G57370 / 824904 AraportID:AT3G57370 Length:362 Species:Arabidopsis thaliana


Alignment Length:338 Identity:89/338 - (26%)
Similarity:135/338 - (39%) Gaps:82/338 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 CSECGLVVGDRVIDVGSEWRTFSNEKSGV---DPSRVGGPENPLLSGGDLSTI------------ 82
            |..|||....|.|          .:.|.|   |..|:..|.|.|||..|||.:            
plant    28 CFGCGLEFKYRPI----------GDLSPVAENDTVRLPDPTNTLLSNTDLSIVTTEHKNGSFDDS 82

  Fly    83 --IGPGTGS-----------------ASFDAFGAPKYQNRRTM-SSSDRSLIS------------ 115
              :..|..|                 :|.|.......||..|: :|||..|.|            
plant    83 LSLNLGNSSKPRLDPVSIATAKLMNGSSNDFLSLGTSQNSETITASSDEFLFSDLGHLQKFSFDP 147

  Fly   116 ------------AFKEISSMADRINLPKTIVDRANNLFKQVHDGKNLKGRSNDAKASACLYIACR 168
                        :...|.::::.:.||.||..:||.:||.|.  ...:|:..:...:||:|||||
plant   148 LSMASTKPNKALSIVSIEAISNGLKLPATIKGQANEIFKVVE--SYARGKERNVLFAACIYIACR 210

  Fly   169 QEGVPRTFKEICA-VSKISKKEIGRCFKLTLKALETSVD---LITTADFMCRFCANLDLPNMVQR 229
            ...:.||.:||.. .:|.|..:|........:.||.:.:   .|.||:|:.|||:...|......
plant   211 DNDMTRTMREISRFANKASISDISETVGFIAEKLEINKNWYMSIETANFIKRFCSIFRLDKEAVE 275

  Fly   230 AATHIAKKAVEMDIVPG----RSPISVAAAAIYMASQASEHKRSQKEIGDIAGVADVTIRQSYKL 290
            ||...|:   ..|.:..    |:|:||||..:|:.::.|..|...|.:.:..|||:.||:.:|..
plant   276 AALEAAE---SYDYMTNGCSRRAPVSVAAGIVYVIARLSYEKHLLKGLIEATGVAENTIKGTYGD 337

  Fly   291 MYPHAAKLFPEDF 303
            :||:...:.|..|
plant   338 LYPNLPTIVPTWF 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TfIIBNP_476888.1 SUA7 1..289 CDD:441015 84/322 (26%)
AT3G57370NP_001319778.1 tfb <152..338 CDD:234758 55/190 (29%)

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