DRSC/TRiP Functional Genomics Resources

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Protein Alignment TfIIB and Brf1

DIOPT Version :10

Sequence 1:NP_476888.1 Gene:TfIIB / 34430 FlyBaseID:FBgn0004915 Length:315 Species:Drosophila melanogaster
Sequence 2:NP_082469.2 Gene:Brf1 / 72308 MGIID:1919558 Length:676 Species:Mus musculus


Alignment Length:272 Identity:67/272 - (24%)
Similarity:113/272 - (41%) Gaps:36/272 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 DYRAGDMICSECGLVVGDRVIDVGSEWRTFSNEKSGVDPSRV-------GGPENPLLSGGDLSTI 82
            |...||.:|:.||.|:.|.:|  .||.:...|  ||...|.|       |..:.|.|.||     
Mouse    17 DAARGDAVCTGCGSVLEDNII--VSEVQFVEN--SGGGSSAVGQFVSLDGAGKTPTLGGG----- 72

  Fly    83 IGPGTGSASFDAFGAPKYQNRRTMSSSDRSLISAFKEISSMADRINLPKTIVDRANNLFKQVHDG 147
            .....|..|    .|...||.|             :.|..:..::.|.:..:|.|.|.||.....
Mouse    73 FHVNLGKES----RAQTLQNGR-------------RHIHHLGSQLQLNQHCLDTAFNFFKMAVSK 120

  Fly   148 KNLKGRSNDAKASACLYIACRQEGVPRTFKEICAVSKISKKEIGRCFKLTLKALETSVDLITTAD 212
            ...:||......:||||:.||.||.|....::..:.:::...:|:.|.|..:.|..:...|....
Mouse   121 HLTRGRKMAHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYVLGKTFLLLARELCINAPAIDPCL 185

  Fly   213 FMCRFCANLDL---PNMVQRAATHIAKKAVEMDIVPGRSPISVAAAAIYMASQASEHKRSQKEIG 274
            ::.||...|:.   .:.|...|..:.::.....:..||.|..:..||:.:|::..:.:|:.||:.
Mouse   186 YIPRFAHLLEFGEKNHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARMHDFRRTVKEVI 250

  Fly   275 DIAGVADVTIRQ 286
            .:..|.:.|:|:
Mouse   251 SVVKVCESTLRK 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TfIIBNP_476888.1 SUA7 1..289 CDD:441015 67/272 (25%)
Brf1NP_082469.2 TF_Zn_Ribbon 4..46 CDD:400527 11/30 (37%)
CYCLIN_TFIIIB90_rpt1 84..174 CDD:410256 24/102 (24%)
Repetitive region 91..172 21/80 (26%)
CYCLIN_TFIIIB90_rpt2 179..270 CDD:410257 18/84 (21%)
Repetitive region 185..269 17/78 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 342..371
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 386..408
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 425..449
BRF1 449..546 CDD:462250
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 543..603
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 617..653
Blue background indicates that the domain is not in the aligned region.

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