Protein Alignment TfIIB and Brf

DIOPT Version :10

• Sequence 1: NP_476888.1
• Gene: TfIIB / 34430
• FlyBaseID: FBgn0004915
• Length: 315
• Species: Drosophila melanogaster
• Sequence 2: NP_650616.2
• Gene: Brf / 42087
• FlyBaseID: FBgn0038499
• Length: 662
• Species: Drosophila melanogaster
• Alignment Length: 267
• Identity: 64/267 - (23%)
• Similarity: 120/267 - (44%)
• Gaps: 24/267 - (8%)

  Fly    24 EDYRAGDMICSECGLVVGDRVIDVGSEWRTFSNEKSGVDPSRVGGPENPLLSGGDLSTIIGPGTG 88
            ||...||.:|..||.|:.|.:|....::     |:.|...:.:|...:...|||..:
  Fly    17 EDNARGDRVCMNCGSVLEDSLIVSEVQF-----EEVGHGAAAIGQFVSAESSGGATN-------- 68

  Fly    89 SASFDAFGAPKYQNRRTMSSSDRSLISAFKEISSMADRINLPKTIVDRANNLFKQVHDGKNL-KG 152
                  :|..|:|......|.:.::..|.|:|:.:..::.|.:...|.|.|.||... |::| :|
  Fly    69 ------YGYGKFQVGSGTESREVTIKKAKKDITLLCQQLQLSQHYADTALNFFKMAL-GRHLTRG 126

  Fly   153 RSNDAKASACLYIACRQEGVPRTFKEICAVSKISKKEIGRCFKLTLKALETSVDLITTADFMCRF 217
            |.:....:||:|:.||.||......:|..|.:|...|:||.:.....||..::..:....::.||
  Fly   127 RKSTHIYAACVYMTCRTEGTSHLLIDISDVQQICSYELGRTYLKLSHALCINIPSLDPCLYIMRF 191

  Fly   218 CANLDL---PNMVQRAATHIAKKAVEMDIVPGRSPISVAAAAIYMASQASEHKRSQKEIGDIAGV 279
            ...|.|   .:.|...|..|.::..:..:..||.|..:..||:.:|::..:..|:..::..:..:
  Fly   192 ANRLQLGAKTHEVSMTALRIVQRMKKDCMHSGRRPTGLCGAALLIAARMHDFSRTMLDVIGVVKI 256

  Fly   280 ADVTIRQ 286
            .:.|:|:
  Fly   257 HESTLRK 263

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TfIIB	NP_476888.1	SUA7	1..289	CDD:441015	64/267 (24%)
Brf	NP_650616.2	TF_Zn_Ribbon	5..46	CDD:400527	10/33 (30%)
		CYCLIN_TFIIIB90_rpt1	85..175	CDD:410256	26/90 (29%)
		CYCLIN_TFIIIB90_rpt2	180..271	CDD:410257	16/84 (19%)
		BRF1	437..531	CDD:462250