DRSC/TRiP Functional Genomics Resources

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Protein Alignment TfIIB and TfIIB

DIOPT Version :10

Sequence 1:NP_476888.1 Gene:TfIIB / 34430 FlyBaseID:FBgn0004915 Length:315 Species:Drosophila melanogaster
Sequence 2:XP_310128.4 Gene:TfIIB / 1271351 VectorBaseID:AGAMI1_010167 Length:316 Species:Anopheles gambiae


Alignment Length:314 Identity:285/314 - (90%)
Similarity:301/314 - (95%) Gaps:1/314 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASTSR-LDNNKVCCYAHPESPLIEDYRAGDMICSECGLVVGDRVIDVGSEWRTFSNEKSGVDPS 64
            |||:|| ...||||||:|||:||||||||||||||||||||||||||||||||||||||:|||||
Mosquito     1 MASSSRDAHLNKVCCYSHPEAPLIEDYRAGDMICSECGLVVGDRVIDVGSEWRTFSNEKAGVDPS 65

  Fly    65 RVGGPENPLLSGGDLSTIIGPGTGSASFDAFGAPKYQNRRTMSSSDRSLISAFKEISSMADRINL 129
            |||||||||||||||||:||||||.|||||||..|||||||||||||:||:||||||:|||||||
Mosquito    66 RVGGPENPLLSGGDLSTMIGPGTGPASFDAFGTAKYQNRRTMSSSDRALIAAFKEISTMADRINL 130

  Fly   130 PKTIVDRANNLFKQVHDGKNLKGRSNDAKASACLYIACRQEGVPRTFKEICAVSKISKKEIGRCF 194
            ||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mosquito   131 PKTITDRANNLFKQVHDGKNLKGRSNDAKASACLYIACRQEGVPRTFKEICAVSKISKKEIGRCF 195

  Fly   195 KLTLKALETSVDLITTADFMCRFCANLDLPNMVQRAATHIAKKAVEMDIVPGRSPISVAAAAIYM 259
            |||||||.||||||||||||.||||||||||:|||||||||:|||||||||||||||||||||||
Mosquito   196 KLTLKALATSVDLITTADFMSRFCANLDLPNVVQRAATHIARKAVEMDIVPGRSPISVAAAAIYM 260

  Fly   260 ASQASEHKRSQKEIGDIAGVADVTIRQSYKLMYPHAAKLFPEDFKFTTPIDQLP 313
            |||||::|::.||||||||||||||||||:|||||||:||||||.|.|||||||
Mosquito   261 ASQASDNKKTHKEIGDIAGVADVTIRQSYRLMYPHAAELFPEDFNFHTPIDQLP 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TfIIBNP_476888.1 SUA7 1..289 CDD:441015 263/288 (91%)
TfIIBXP_310128.4 SUA7 1..290 CDD:441015 264/289 (91%)

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