DRSC/TRiP Functional Genomics Resources

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Protein Alignment TfIIB and LOC1271350

DIOPT Version :10

Sequence 1:NP_476888.1 Gene:TfIIB / 34430 FlyBaseID:FBgn0004915 Length:315 Species:Drosophila melanogaster
Sequence 2:XP_061512761.1 Gene:LOC1271350 / 1271350 VectorBaseID:AGAMI1_010778 Length:314 Species:Anopheles gambiae


Alignment Length:313 Identity:173/313 - (55%)
Similarity:217/313 - (69%) Gaps:9/313 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASTSRLDNNKVCCYAHPESPLIEDYRAGDMICSECGLVVGDRVIDVGSEWRTFSNEKSGVDPSR 65
            :::||...|..||.| ||.:.|::||..||||||:|||:||||:||..|||||||::.|..||||
Mosquito     5 VSNTSPAANQLVCPY-HPAAALVDDYHTGDMICSDCGLIVGDRMIDPSSEWRTFSDDPSRPDPSR 68

  Fly    66 VGGPENPLLSGGDLSTIIGPGTGSASFDAFGAPKYQNRRTMSSSDRSLISAFKEISSMADRINLP 130
            ||..: |:|.  :|:|.|.|     |.:.|..|.:.:...|.::.|.|:..|..|::||:|||.|
Mosquito    69 VGSTD-PVLQ--NLATFIQP-----SANGFEPPNHFSFLKMDTTTRKLMFGFAMIATMAERINAP 125

  Fly   131 KTIVDRANNLFKQVHDGKNLKGRSNDAKASACLYIACRQEGVPRTFKEICAVSKISKKEIGRCFK 195
            .:||..|..:|||..:...|..||.:|.:.||||||||||||||||||:|||...||||||||||
Mosquito   126 ASIVSHAKTIFKQALEPAALTHRSLEAVSVACLYIACRQEGVPRTFKEMCAVCSASKKEIGRCFK 190

  Fly   196 LTLKALETSVDLITTADFMCRFCANLDLPNMVQRAATHIAKKAVEMDIVPGRSPISVAAAAIYMA 260
            |..|.|.||:|.||:.|||.|||:.|.||:.||:||||||:||.|.|:||.|||||||||||:||
Mosquito   191 LITKVLATSLDHITSEDFMQRFCSKLFLPHEVQKAATHIAQKAFEADLVPDRSPISVAAAAIFMA 255

  Fly   261 SQASEHKRSQKEIGDIAGVADVTIRQSYKLMYPHAAKLFPEDFKFTTPIDQLP 313
            ||.|....|.|.:..|||||::||:||||||:|||.:|||....|...|..||
Mosquito   256 SQVSATAMSLKAVAAIAGVAELTIKQSYKLMHPHAWELFPRTHLFYKHIGMLP 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TfIIBNP_476888.1 SUA7 1..289 CDD:441015 159/287 (55%)
LOC1271350XP_061512761.1 None

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