DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wdfy2 and GGA1

DIOPT Version :10

Sequence 1:NP_609400.1 Gene:Wdfy2 / 34425 FlyBaseID:FBgn0032246 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_010645.1 Gene:GGA1 / 851960 SGDID:S000002766 Length:557 Species:Saccharomyces cerevisiae


Alignment Length:288 Identity:45/288 - (15%)
Similarity:86/288 - (29%) Gaps:94/288 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 YALSEDCNRLSFLRDYLSHQARVMAVVFSKTHKWILSAGKDKQFAYHCTESGKRVGGYNFETPCT 167
            |::....:|..||.|.:........:.:||..:.||.|.::.                 ::|.|.
Yeast    92 YSIHLQISRKEFLNDLVKRFPEQPPLRYSKVQQMILEAIEEW-----------------YQTICK 139

  Fly   168 ALQFDALAKYAFVGDHAGQITMLRCDVQGVQLITTFNGHSAEIRCLKWVEGPQLLFSGACDQSVL 232
            ...:....:|                :..:..:..:.|::               |.....:::.
Yeast   140 HASYKDDLQY----------------INDMHKLLKYKGYT---------------FPKVGSENLA 173

  Fly   233 VWDVGGKRGTIYELQGHSNKVSALSYANHTQQLISCGEDSVVVFWEMNAMRKEVPGWVD------ 291
            |.....:..|..|||....:..|..    .::|:..|:...:.  |.|.:.|.:.|:.|      
Yeast   174 VLRPNDQLRTPSELQEEQERAQAAK----LEELLRSGKPDDLK--EANKLMKIMAGFKDDTKVAV 232

  Fly   292 ----TNNCQLCSR--PFFWNFRSMMDQKQLGIRQHHCRHCGKAVCDNCSTNRINIPIMGFEFDVR 350
                .|......|  ..|....:..|:..|.                      |..|.....|::
Yeast   233 KQAINNELNKLKRKADLFNEMLTSADEPDLE----------------------NEAIQELYGDLK 275

  Fly   351 TCDPCYKQLQTVER------PSLASFND 372
            :..|.:|:|...||      .:|:.|||
Yeast   276 SAQPKFKKLIEEERDDDALVSNLSKFND 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdfy2NP_609400.1 WD40 24..279 CDD:475233 23/175 (13%)
WD40 repeat 35..72 CDD:293791
WD40 repeat 80..117 CDD:293791 4/13 (31%)
WD40 repeat 125..161 CDD:293791 5/35 (14%)
WD40 repeat 166..205 CDD:293791 2/38 (5%)
WD40 repeat 211..248 CDD:293791 5/36 (14%)
WD40 repeat 253..283 CDD:293791 5/29 (17%)
FYVE_WDFY1_like 287..356 CDD:277258 11/80 (14%)
WD40 repeat 324..371 CDD:293791 9/52 (17%)
GGA1NP_010645.1 VHS_GGA_fungi 22..160 CDD:340795 13/100 (13%)
GGA_N-GAT 195..222 CDD:465702 6/32 (19%)
GAT_GGA_fungi 233..320 CDD:410583 17/93 (18%)
Alpha_adaptinC2 443..555 CDD:460735
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.