Protein Alignment Wdfy2 and Pafah1b1

DIOPT Version :9

• Sequence 1: NP_001188779.1
• Gene: Wdfy2 / 34425
• FlyBaseID: FBgn0032246
• Length: 408
• Species: Drosophila melanogaster
• Sequence 2: NP_113951.1
• Gene: Pafah1b1 / 83572
• RGDID: 620331
• Length: 410
• Species: Rattus norvegicus
• Identity: / - (0%)
• Similarity: / - (0%)
• Gaps: / - (0%)

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Wdfy2	NP_001188779.1	WD40	4..405	CDD:225201
		WD40	24..279	CDD:295369
		WD40 repeat	35..72	CDD:293791
		WD40 repeat	80..117	CDD:293791
		WD40 repeat	125..161	CDD:293791
		WD40 repeat	166..205	CDD:293791
		WD40 repeat	211..248	CDD:293791
		WD40 repeat	253..283	CDD:293791
		FYVE_WDFY1_like	287..356	CDD:277258
		WD40 repeat	324..371	CDD:293791
Pafah1b1	NP_113951.1	Interaction with NDEL1. /evidence=ECO:0000255|HAMAP-Rule:MF_03141	1..102
		Interaction with NDE1. /evidence=ECO:0000255|HAMAP-Rule:MF_03141	1..66
		Required for self-association and interaction with PAFAH1B2 and PAFAH1B3. /evidence=ECO:0000255|HAMAP-Rule:MF_03141	1..38
		LisH	10..34	CDD:369916
		Interaction with dynein and dynactin. /evidence=ECO:0000255|HAMAP-Rule:MF_03141	83..410
		WD40	104..408	CDD:238121
		WD40 repeat	111..148	CDD:293791
		WD40 repeat	154..190	CDD:293791
		WD40 repeat	195..231	CDD:293791
		WD40 repeat	238..273	CDD:293791
		WD40 repeat	279..335	CDD:293791
		WD40 repeat	341..377	CDD:293791
		Interaction with DCX. /evidence=ECO:0000255|HAMAP-Rule:MF_03141	367..409
		WD40 repeat	383..407	CDD:293791
		Interaction with NDEL1. /evidence=ECO:0000255|HAMAP-Rule:MF_03141	388..410

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910