DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wdfy2 and TAF5

DIOPT Version :9

Sequence 1:NP_001188779.1 Gene:Wdfy2 / 34425 FlyBaseID:FBgn0032246 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_197897.3 Gene:TAF5 / 832586 AraportID:AT5G25150 Length:669 Species:Arabidopsis thaliana


Alignment Length:329 Identity:72/329 - (21%)
Similarity:123/329 - (37%) Gaps:80/329 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IKPAQRTNNDRFNTSKKPELLSKLEGSSDDVNAAIL----------------------IPGENGV 47
            :.||.|.         ||||  .|...|.||..:||                      :...||:
plant   302 VSPAPRV---------KPEL--ALPVMSTDVEQSILEDLRNRVQLSSVAMPSVSFYTFVNTHNGL 355

  Fly    48 --ISVS----------DDKTVRVWLKRDSGQYWPSICQYMPSGCTAIEYVSESRHLYVGQENGTV 100
              .|:|          .|.:::||.....||          :|..|::..::|....:| .||. 
plant   356 NCSSISHDGSLVAGGFSDSSIKVWDMAKIGQ----------AGSGALQAENDSSDQSIG-PNGR- 408

  Fly   101 TQYALSEDCNRLSFLRDYLSHQARVMAVVFSKTHKWILSAGKDKQFAYHCTESGKRV---GGYNF 162
            ..|.|            .|.|...|.:..||....::||:..|.......|:....:   .|:|:
plant   409 RSYTL------------LLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNY 461

  Fly   163 ETPCTALQFDALAKYAFVGDHAGQITMLRCDVQGVQLITTFNGHSAEIRCLKWVEGPQLLFSGAC 227
              |....||.....|.....|.....:...|  .:|.:....||.:::.|::|......:.:|:.
plant   462 --PVWDAQFSPFGHYFASCSHDRTARIWSMD--RIQPLRIMAGHLSDVDCVQWHPNCNYIATGSS 522

  Fly   228 DQSVLVWDV-GGKRGTIYELQGHSNKVSALSYANHTQQLISCGEDSVVVFWEMNAMRKEVPGWVD 291
            |::|.:||| .|:...|:  .||.:.|.:|:.:...:.:.|..||..::.|:::..|...| .:.
plant   523 DKTVRLWDVQTGECVRIF--IGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITP-LMG 584

  Fly   292 TNNC 295
            .|:|
plant   585 HNSC 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdfy2NP_001188779.1 WD40 4..405 CDD:225201 72/329 (22%)
WD40 24..279 CDD:295369 62/292 (21%)
WD40 repeat 35..72 CDD:293791 12/70 (17%)
WD40 repeat 80..117 CDD:293791 7/36 (19%)
WD40 repeat 125..161 CDD:293791 8/38 (21%)
WD40 repeat 166..205 CDD:293791 6/38 (16%)
WD40 repeat 211..248 CDD:293791 10/37 (27%)
WD40 repeat 253..283 CDD:293791 6/29 (21%)
FYVE_WDFY1_like 287..356 CDD:277258 3/9 (33%)
WD40 repeat 324..371 CDD:293791
TAF5NP_197897.3 TFIID_NTD2 64..188 CDD:398277
WD40 repeat 357..416 CDD:293791 15/82 (18%)
WD40 414..663 CDD:238121 42/182 (23%)
WD40 repeat 422..458 CDD:293791 6/35 (17%)
WD40 repeat 463..499 CDD:293791 6/37 (16%)
WD40 repeat 506..541 CDD:293791 10/36 (28%)
WD40 repeat 547..583 CDD:293791 8/36 (22%)
WD40 repeat 589..622 CDD:293791 72/329 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.