DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wdfy2 and Fbxw11

DIOPT Version :9

Sequence 1:NP_001188779.1 Gene:Wdfy2 / 34425 FlyBaseID:FBgn0032246 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_598776.1 Gene:Fbxw11 / 103583 MGIID:2144023 Length:563 Species:Mus musculus


Alignment Length:295 Identity:63/295 - (21%)
Similarity:118/295 - (40%) Gaps:52/295 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 ENGVISVSDDKTVRVW-------LKRDSGQYWPSICQYMPSGCTAIEYVSESRHLYVGQENGTVT 101
            ::.:||...|.::::|       ||..:|.....:|         ::|  :.|.:..|..:.||.
Mouse   271 DDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLC---------LQY--DERVIVTGSSDSTVR 324

  Fly   102 QYALSEDCNRLSFLRDYLSHQARVMAVVFSKTHKWILSAGKDKQFAY----HCTESGKRVGGYNF 162
            .:    |.|....|...:.|...|:.:.||  :..:::..||:..|.    ..|:...|......
Mouse   325 VW----DVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASATDITLRRVLVGH 383

  Fly   163 ETPCTALQFDALAKYAFVGDHAGQITMLRCDVQGVQLITTFNGHSAEIRCLKWVEGPQLLFSGAC 227
            ......:.||  .||  :...:|..|:........:.:.|.|||...|.||::.:  :|:.||:.
Mouse   384 RAAVNVVDFD--DKY--IVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSS 442

  Fly   228 DQSVLVWDV--GGKRGTIYELQGHSNKVSALSYANHTQQLISCGEDSVVVFWEMN-AMRKEVPGW 289
            |.::.:||:  |   ..:..|:||...|..:.:.|  ::::|...|..:..|::. |:....|. 
Mouse   443 DNTIRLWDIECG---ACLRVLEGHEELVRCIRFDN--KRIVSGAYDGKIKVWDLQAALDPRAPA- 501

  Fly   290 VDTNNCQLCSRPFFWN----FRSMMDQKQLGIRQH 320
                 ..||.|....:    ||...|:.|:....|
Mouse   502 -----STLCLRTLVEHSGRVFRLQFDEFQIISSSH 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdfy2NP_001188779.1 WD40 4..405 CDD:225201 63/295 (21%)
WD40 24..279 CDD:295369 53/247 (21%)
WD40 repeat 35..72 CDD:293791 7/34 (21%)
WD40 repeat 80..117 CDD:293791 8/36 (22%)
WD40 repeat 125..161 CDD:293791 8/39 (21%)
WD40 repeat 166..205 CDD:293791 7/38 (18%)
WD40 repeat 211..248 CDD:293791 10/38 (26%)
WD40 repeat 253..283 CDD:293791 6/30 (20%)
FYVE_WDFY1_like 287..356 CDD:277258 9/38 (24%)
WD40 repeat 324..371 CDD:293791
Fbxw11NP_598776.1 Beta-TrCP_D 99..137 CDD:403372
F-box-like 141..188 CDD:403981
WD40 261..539 CDD:238121 63/295 (21%)
WD40 repeat 264..299 CDD:293791 6/27 (22%)
WD40 repeat 305..339 CDD:293791 9/48 (19%)
WD40 repeat 344..381 CDD:293791 8/38 (21%)
WD40 repeat 388..421 CDD:293791 7/36 (19%)
WD40 repeat 427..461 CDD:293791 10/38 (26%)
WD40 repeat 467..510 CDD:293791 10/50 (20%)
WD40 repeat 516..538 CDD:293791 5/16 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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