DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS27A and RUB1

DIOPT Version :10

Sequence 1:NP_476778.1 Gene:RpS27A / 34420 FlyBaseID:FBgn0003942 Length:156 Species:Drosophila melanogaster
Sequence 2:NP_010423.4 Gene:RUB1 / 851717 SGDID:S000002546 Length:77 Species:Saccharomyces cerevisiae


Alignment Length:76 Identity:40/76 - (52%)
Similarity:58/76 - (76%) Gaps:0/76 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65
            |.:.|||||||.|::|::.||.:.::|..:::||||||.||||||.|||::|..|::|.::.:..
Yeast     1 MIVKVKTLTGKEISVELKESDLVYHIKELLEEKEGIPPSQQRLIFQGKQIDDKLTVTDAHLVEGM 65

  Fly    66 TLHLVLRLRGG 76
            .|||||.||||
Yeast    66 QLHLVLTLRGG 76

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS27ANP_476778.1 Ubl_ubiquitin 1..76 CDD:340501 38/74 (51%)
Ribosomal_S27 103..147 CDD:460261
RUB1NP_010423.4 Ubl_NEDD8 3..76 CDD:340504 37/72 (51%)
Blue background indicates that the domain is not in the aligned region.

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