DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS27A and F14D2.11

DIOPT Version :10

Sequence 1:NP_476778.1 Gene:RpS27A / 34420 FlyBaseID:FBgn0003942 Length:156 Species:Drosophila melanogaster
Sequence 2:NP_494511.2 Gene:F14D2.11 / 184461 WormBaseID:WBGene00017459 Length:195 Species:Caenorhabditis elegans


Alignment Length:72 Identity:28/72 - (38%)
Similarity:37/72 - (51%) Gaps:5/72 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 66
            |.||: |.|||.||.|..|||:|..|.::...    ....|:.:.||.|.|..|..:|||...||
 Worm   129 QYFVR-LNGKTRTLNVNASDTVEQGKMQLCHN----ARSTRMSYGGKPLSDQITFGEYNISNNST 188

  Fly    67 LHLVLRL 73
            :.|..|:
 Worm   189 MDLHFRI 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS27ANP_476778.1 Ubl_ubiquitin 1..76 CDD:340501 28/72 (39%)
Ribosomal_S27 103..147 CDD:460261
F14D2.11NP_494511.2 Ubl1_cv_Nsp3_N-like 128..195 CDD:475130 27/70 (39%)
Blue background indicates that the domain is not in the aligned region.

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