DRSC/TRiP Functional Genomics Resources

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Protein Alignment da and Tcf12

DIOPT Version :10

Sequence 1:NP_001356956.1 Gene:da / 34413 FlyBaseID:FBgn0267821 Length:775 Species:Drosophila melanogaster
Sequence 2:NP_037308.1 Gene:Tcf12 / 25720 RGDID:3829 Length:707 Species:Rattus norvegicus


Alignment Length:757 Identity:230/757 - (30%)
Similarity:319/757 - (42%) Gaps:238/757 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 QPTGTVGADRGGGGGYHSPYGS-------LGVENGMYPSDFNSMHDTVNGGNNRYANASTVDQYF 83
            ||:.:..:.|   |...||:.|       ||...|:.|:.|  |:..:.|..:...:.|...:  
  Rat    65 QPSPSYDSSR---GFTDSPHYSDHLNDSRLGTHEGLSPTPF--MNSNLIGKTSERGSFSLYSR-- 122

  Fly    84 DSAAAGSGGAWCQPQMSSANSYMGQSAYQNSGPLSG------HSIDQQQQQVHQADGLGMGGGGG 142
            ||..:|     ||..:...:..:|..|..:|....|      .:...:::.:|.:          
  Rat   123 DSGLSG-----CQSSLLRQDLGLGSPAQLSSSGKPGTPYYSFSATSSRRRPLHDS---------- 172

  Fly   143 GGVGADGMHC----PVTTGL-------------------------PPISSFRPT----------- 167
              |..|.:..    .|..||                         ||.|.|..|           
  Rat   173 --VALDPLQAKKVRKVPPGLPSSVYAPSPNSDDFNRESPSYPSPKPPTSMFASTFFMQDGTHSSS 235

  Fly   168 -----SGGIGGPGAGQQAPVNVNVNPPAVFNSPQAHNHNHTVQAQHSALSTAGPL-GHHSLNHTP 226
                 |.|:..||.|            .:..:..:|         .|..|:.|.| .|..|::.|
  Rat   236 DLWSSSNGMSQPGFG------------GILGTSTSH---------MSQSSSYGSLHSHDRLSYPP 279

  Fly   227 HAHSHT-----LPLPHALPHGHTLPHPHHSQQNSPAVQSSDAFSGA-GASVKVAGAGNSSAAALR 285
            |:.|.|     ||...:...|.|...|:.:..::|.:..||:..|. |.:...:..|::...|| 
  Rat   280 HSVSPTDINTSLPPMSSFHRGSTSSSPYVAASHTPPINGSDSILGTRGNAAGSSQTGDALGKAL- 343

  Fly   286 QQMYMPADQSISSFGSNPSTPVNSPPPLTQSVVGGGGEPSVSGGSGWGHSVLNGG--PSS-SYAS 347
            ..:|.| |.:.|||.|||||||.||.|||            :|.|.|..:   ||  ||| ||. 
  Rat   344 ASIYSP-DHTSSSFPSNPSTPVGSPSPLT------------AGTSQWPRA---GGQAPSSPSYE- 391

  Fly   348 EMVPVSSLHTMAS-------------------VFQGVRME---ERLDDALNVLRNHCEPEMLAGV 390
                 :|||::.:                   |.:..|||   :|||||::|||||.     .|.
  Rat   392 -----NSLHSLKNRVEQQLHEHLQDAMSFLKDVCEQSRMEDRLDRLDDAIHVLRNHA-----VGP 446

  Fly   391 NQSL-ASIDNIDALTSFVPNSP-SHLGSG-GNSGSVSNTSNAALV-------------HEVLALG 439
            :.|| .|..:|.:|.....|:| .:|.|. |.|..|:|:.:|::|             |.||:..
  Rat   447 STSLPTSHSDIHSLLGPSHNAPIGNLNSNYGGSSLVTNSRSASMVGTHREDSVSLNGNHSVLSST 511

  Fly   440 AAAA-------------AGTSGQSVGGAGSLASLKLDRSASTSLPKQTKKRKEHTAISNSVPAGV 491
            .||:             .|...||    ||:        ..|.:..:.|::.|:.   :..|:. 
  Rat   512 VAASNTELNHKTPESFRGGVQNQS----GSV--------VPTEIKTENKEKDENL---HEPPSS- 560

  Fly   492 STTSSLTSLDISDTKPTSSIESSNSGLQQHSQGKGTKRPRRYCSSADEDDDAEPAVKAIREKERR 556
                       .|.|  |..|||...::..|:|:        .||.:||:|..|..|..||||||
  Rat   561 -----------DDMK--SDDESSQKDIKVSSRGR--------TSSTNEDEDLNPEQKIEREKERR 604

  Fly   557 QANNARERIRIRDINEALKELGRMCMTHLKSDKPQTKLGILNMAVEVIMTLEQQVRERNLNPKAA 621
            .|||||||:|:||||||.|||||||..||||:||||||.||:.||.||::|||||||||||||||
  Rat   605 MANNARERLRVRDINEAFKELGRMCQLHLKSEKPQTKLLILHQAVAVILSLEQQVRERNLNPKAA 669

  Fly   622 CLKRREEEKAEDGPKLSAQHHMIPQPQQVGGT-PGSSYHSQP 662
            |||||||||..   ..||:     .|..:.|| ||.|..:.|
  Rat   670 CLKRREEEKVS---AASAE-----PPTTLPGTHPGLSETTNP 703

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
daNP_001356956.1 bHLH_E-protein_Da_like 554..623 CDD:381473 55/68 (81%)
Tcf12NP_037308.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 25..109 13/48 (27%)
Leucine-zipper 119..140 5/27 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 140..222 13/93 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 249..313 17/84 (20%)
CytochromB561_N 275..>411 CDD:480696 49/158 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 349..393 27/65 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 521..605 29/120 (24%)
bHLH_E-protein_TCF4_E2-2 596..680 CDD:381515 68/83 (82%)
Class A specific domain 657..680 22/22 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 675..707 13/37 (35%)

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