DRSC/TRiP Functional Genomics Resources

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Protein Alignment da and hlh-2

DIOPT Version :10

Sequence 1:NP_001356956.1 Gene:da / 34413 FlyBaseID:FBgn0267821 Length:775 Species:Drosophila melanogaster
Sequence 2:NP_001021581.1 Gene:hlh-2 / 172458 WormBaseID:WBGene00001949 Length:399 Species:Caenorhabditis elegans


Alignment Length:443 Identity:117/443 - (26%)
Similarity:188/443 - (42%) Gaps:104/443 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 PHAHSH-------TLPLPHALPHGHTLPHPHHSQQNSPAVQSSDAF------SGAGASVKVAGAG 277
            |:|:.:       |:.:|......|..|:|   ...:..:..|.||      :...|||   .|.
 Worm    27 PNAYDYPYNIDPTTIQMPDYWSGYHLNPYP---PMQTTDIDYSSAFLPTHPPTETPASV---AAP 85

  Fly   278 NSSAAALRQQMYMPADQSISSFGSNPSTPVNSPPPL-TQSVVGGGGEPSVSGGSGWGHSVLNGGP 341
            .|:.:.::     |...:.|:..:.|||   :|.|. |..|:......:.:..|....:::...|
 Worm    86 TSATSDIK-----PIHATSSTSTTAPST---APAPTSTTDVLELKPTTAPATNSAETSAIVAPQP 142

  Fly   342 SSSYASEMVPVSSLHTMASVFQGV---RMEERLDDALNVLRNHCEPEMLAGVNQSLASIDNIDAL 403
            .::..:.:..:||::|....:.|.   ..:.:..:|:|...: ..|....|.:.|:|...:....
 Worm   143 LTNLTAPIDAMSSMYTWPQTYPGYLPPSEDNKASEAVNPYIS-IPPTYTFGADPSVADFSSYQQQ 206

  Fly   404 TSFVPNSPSHLGSGGNSGSVSNTSNAALVHEVLALGAA------AAAGTSGQSVGGAGSLASLKL 462
            .:..||     |.||::..|...      |:....|.:      ...|.:|...|.:.|  |::.
 Worm   207 LAGQPN-----GLGGDTNLVDYN------HQFPPAGMSPHFDPNGYPGMTGMPPGSSAS--SVRN 258

  Fly   463 DRSASTSLPKQTKKRKEHTAISNSVPAGVSTTSSLTSLDISDTKPTSSIESSNSGLQQHSQGKGT 527
            |:|||    :.|.:|:.....|:.:|...|::|.|               |.|..:         
 Worm   259 DKSAS----RATSRRRVQGPPSSGIPTRHSSSSRL---------------SDNESM--------- 295

  Fly   528 KRPRRYCSSADEDDDAEPAVKAIREKERRQANNARERIRIRDINEALKELGRMCMTH-LKSDKPQ 591
                    |.|:|.|            ||..||||||:|:||||.|.|||||||..| ..:::.|
 Worm   296 --------SDDKDTD------------RRSQNNARERVRVRDINSAFKELGRMCTQHNQNTERNQ 340

  Fly   592 TKLGILNMAVEVIMTLEQQVRERNLNPKA-ACLKRREEE---KAEDGPKLSAQ 640
            ||||||:.||.||..||:|||:||:|||. |.:||:.::   |..|....|||
 Worm   341 TKLGILHNAVSVITQLEEQVRQRNMNPKVMAGMKRKPDDDKMKMLDDNAPSAQ 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
daNP_001356956.1 bHLH_E-protein_Da_like 554..623 CDD:381473 44/70 (63%)
hlh-2NP_001021581.1 bHLH_E-protein_E47-like 297..368 CDD:381513 44/82 (54%)

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