DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk1 and cdc2cAt

DIOPT Version :10

Sequence 1:NP_476797.1 Gene:Cdk1 / 34411 FlyBaseID:FBgn0004106 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_198758.2 Gene:cdc2cAt / 833938 AraportID:AT5G39420 Length:644 Species:Arabidopsis thaliana


Alignment Length:293 Identity:109/293 - (37%)
Similarity:178/293 - (60%) Gaps:13/293 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EDFEKIEKIGEGTYGVVYKGRNRLTGQIVAMKKIRLES-DDEGVPSTAIREISLLKELKHENIVC 65
            |.|:|:||||:|||..|::.|...||::||:||::.:: ..|.:...| |||.:|::|.|.||:.
plant   103 EAFQKLEKIGQGTYSSVFRAREVETGKMVALKKVKFDNLQPESIRFMA-REILILRKLNHPNIMK 166

  Fly    66 LEDVLME--ENRIYLIFEFLSMDLKKYMDSLPVDKHMESELVRSYLYQITSAILFCHRRRVLHRD 128
            ||.::..  .:.|||:||::..||.. :.|.|..:..|.: ::.|:.|:...:..||.|.|:|||
plant   167 LEGIVTSRASSSIYLVFEYMEHDLAG-LSSNPDIRFTEPQ-IKCYMKQLLWGLEHCHMRGVIHRD 229

  Fly   129 LKPQNLLIDKSGLIKVADFGLGRSFGIP--VRIYTHEIVTLWYRAPEVLLGSPRYSCPVDIWSIG 191
            :|..|:|::..|::|:.||||. :...|  ....|..:|||||||||:|:||..|...||:||:|
plant   230 IKASNILVNNKGVLKLGDFGLA-NVVTPSNKNQLTSRVVTLWYRAPELLMGSTSYGVSVDLWSVG 293

  Fly   192 CIFAEMATRKPLFQGDSEIDQLFRMFRILKTPTEDIWPGVTSLPDYKNTFPCWSTNQLT--NQLK 254
            |:|||:...||:.:|.:||:||.:::::..:|.:..|.. |.|| :..:|....|.:.|  .:.|
plant   294 CVFAEILMGKPILKGRTEIEQLHKIYKLCGSPQDSFWKR-TKLP-HATSFKPQHTYEATLRERCK 356

  Fly   255 NLDANGIDLIQKMLIYDPVHRISAKDILEHPYF 287
            :|.|.|:.|::.:|..:|..|.:|...|...||
plant   357 DLSATGVYLLETLLSMEPDKRGTASSALNSEYF 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk1NP_476797.1 STKc_CDK1_euk 3..287 CDD:270845 106/290 (37%)
cdc2cAtNP_198758.2 STKc_CDK9_like 105..389 CDD:270832 106/289 (37%)

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