DRSC/TRiP Functional Genomics Resources

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Protein Alignment lft and Epg5

DIOPT Version :10

Sequence 1:NP_609390.1 Gene:lft / 34405 FlyBaseID:FBgn0032230 Length:268 Species:Drosophila melanogaster
Sequence 2:NP_650752.2 Gene:Epg5 / 42256 FlyBaseID:FBgn0038651 Length:2455 Species:Drosophila melanogaster


Alignment Length:170 Identity:34/170 - (20%)
Similarity:64/170 - (37%) Gaps:38/170 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YPEEPFWVLPTVTGFYEDRDYRVNVVEALQEFWQMKQSRGAELKNGALVIYESIPSNSQPYIC-- 65
            :|.||...:|.:.        |:.::     |..:.::|...|..|.||   |:..:|.|.||  
  Fly   894 HPTEPLLFIPELE--------RMEMI-----FQGVNENRPLALYVGMLV---SLHGHSIPLICQH 942

  Fly    66 -FVTLPGGSCFGSFQNCPTKAEARRSSAKIALMNSVFNEHPSRRISDEFIQKAVQDARTSFKGTS 129
             |:.|         |..........:...:.|:..:|.|.|....:.|..|:.:         |:
  Fly   943 GFILL---------QQLLLDHRHAATIRCLELIVPLFLETPETLANCESFQRLI---------TT 989

  Fly   130 QINEGTESGIGAFRFMLEANKGRTMLEFQELMTVFQLLHW 169
            .:| ...:.:...:.|:.||....:||..:.|...|::.:
  Fly   990 LLN-ADRTYLKLAKDMVYANSIGPILELLDNMLHHQIISY 1028

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lftNP_609390.1 LIX1 24..255 CDD:464400 30/149 (20%)
Epg5NP_650752.2 None

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