DRSC/TRiP Functional Genomics Resources

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Protein Alignment ClpP and Clpp

DIOPT Version :9

Sequence 1:NP_001260332.1 Gene:ClpP / 34402 FlyBaseID:FBgn0032229 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_059089.1 Gene:Clpp / 53895 MGIID:1858213 Length:272 Species:Mus musculus


Alignment Length:244 Identity:150/244 - (61%)
Similarity:182/244 - (74%) Gaps:18/244 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TAVSRFLQISSVQCGGRANSVRNINLIPMVVEQTGRGERAYDIFSRLLKERIICLMGNITDDISS 68
            ||||    .|.::......:.|...|||:||||||||||||||:||||:|||:|:||.|.|.::|
Mouse    33 TAVS----CSPLRRSLHGTATRAFPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVAS 93

  Fly    69 TVVAQLLFLQSENVNKPIHLYINSPGGVVTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLAAG 133
            .|:|||||||||:..||||:|||||||||||||||||||||:..||.|||||||.||||||||||
Mouse    94 LVIAQLLFLQSESNKKPIHMYINSPGGVVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAG 158

  Fly   134 APGMRYSLPNARIMIHQPSGGAQGQATDILIHAEEIIKIKRQLTNIYVKHAKNTYEEMSGRMERD 198
            :||||:||||:|||||||||||:||||||.|.||||:|:|:||.|||.||.|.:.:.:...||||
Mouse   159 SPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERD 223

  Fly   199 HFMTPEEAKVLGIIDHVLEHPPETVSETGPASDGGVTSGKAVPEECEKK 247
            .:|:|.||:..||:|.||.|||:              .|:..||..:|:
Mouse   224 RYMSPMEAQEFGILDKVLVHPPQ--------------DGEDEPELVQKE 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClpPNP_001260332.1 clpP 28..222 CDD:178955 140/193 (73%)
ClppNP_059089.1 clpP 53..245 CDD:178955 138/191 (72%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 240..272 9/33 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167845773
Domainoid 1 1.000 267 1.000 Domainoid score I1866
eggNOG 1 0.900 - - E1_COG0740
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4385
Inparanoid 1 1.050 293 1.000 Inparanoid score I2750
Isobase 1 0.950 - 0 Normalized mean entropy S2542
OMA 1 1.010 - - QHG58140
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004853
OrthoInspector 1 1.000 - - oto91995
orthoMCL 1 0.900 - - OOG6_100939
Panther 1 1.100 - - LDO PTHR10381
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2456
SonicParanoid 1 1.000 - - X3980
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.740

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