DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trp1 and Sec62

DIOPT Version :10

Sequence 1:NP_723510.1 Gene:Trp1 / 34333 FlyBaseID:FBgn0011584 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_001344457.1 Gene:Sec62 / 69276 MGIID:1916526 Length:410 Species:Mus musculus


Alignment Length:394 Identity:149/394 - (37%)
Similarity:225/394 - (57%) Gaps:46/394 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 QKVDKPSKDEKNVAKWLKKNVKTKKTKFLSHIVEYFTSSKAIDALLKSKFT---EGSNPLFTTRE 94
            |:|.:|||:||.|||:|:.|..||.|..:.|.|:||.:|||::.||.||:.   :|.:.||||||
Mouse    12 QEVGEPSKEEKAVAKYLRFNCPTKSTNMMGHRVDYFIASKAVECLLDSKWAKAKKGEDALFTTRE 76

  Fly    95 QVIEFLDVMLEHKFFHRAKKV-------PVTLEEIRGKSGG----DKKADKEKTQDKEKDKAKDE 148
            .|:::.:.:|:.:|||||.||       .|..|:.:|||..    |||:.||..::::..|.|::
Mouse    77 SVVDYCNRLLKKQFFHRALKVMKMKYDKDVKKEKDKGKSESGKEDDKKSKKESVKEEKTKKEKEK 141

  Fly   149 KKDTDPEGDNGQGDGGASGNEKEKEKKEKKKRKIRLDMHPEQIFVDGSEAYVWIYDPIPLHYWIF 213
            |||.:.|....:...|.       .||::.|:|.:|:.|.:|:|:||:|.:||||||:.:..::.
Mouse   142 KKDGEKEDSKKEETPGT-------PKKKETKKKFKLEPHDDQVFLDGNEVFVWIYDPVHIKTFVM 199

  Fly   214 GFILLLGAVGICLFPLWPPLLRKGVYYLSIAAAGFLVFILALTIVRLIVFIIVWALTGGKLHFWI 278
            |.||::..:...||||||..:|.||||||:.|..|:..||.|.|.|.|:|:|:|.:|||:.|||.
Mouse   200 GLILVIAVIAATLFPLWPAEMRVGVYYLSVGAGCFVASILLLAIARCILFLIIWLITGGRHHFWF 264

  Fly   279 FPNLTEDVSFFASFWPLYESNYNSDPNNSSAKTDKKSKSKDKKK---------EKESDAEDTAVD 334
            .||||.||.|..||.|||...|...  .:..|.|:||::|.::|         ||:.|.|.....
Mouse   265 LPNLTADVGFIDSFRPLYTHEYKGP--KADLKKDEKSETKKQQKSDSEEKSDSEKKEDEEGKGAP 327

  Fly   335 AD-------GDADGDVDAEVSTLEPEKIELIKEHDTDMEIRKRRKV-----GADDYEEDDVDEEE 387
            ||       |:...|.|::  ..|.::.:....:..|.|:..:.::     |..|.|:||.|.|.
Mouse   328 ADHGPEGSGGERHSDTDSD--RREDDRSQHSSGNGNDFEMITKEELEQQTDGDCDEEDDDKDGEL 390

  Fly   388 TKAQ 391
            .|:|
Mouse   391 RKSQ 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trp1NP_723510.1 Sec62 108..299 CDD:461073 86/201 (43%)
Sec62NP_001344457.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 106..167 20/67 (30%)
Sec62 <170..285 CDD:461073 58/114 (51%)
MSCRAMM_ClfA <291..362 CDD:468110 16/72 (22%)

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