DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42366 and nmo

DIOPT Version :10

Sequence 1:NP_723501.2 Gene:CG42366 / 34319 FlyBaseID:FBgn0259712 Length:706 Species:Drosophila melanogaster
Sequence 2:NP_001356976.1 Gene:nmo / 38890 FlyBaseID:FBgn0011817 Length:439 Species:Drosophila melanogaster


Alignment Length:347 Identity:105/347 - (30%)
Similarity:170/347 - (48%) Gaps:25/347 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LGDGTYGTVVLGQRKDTGEKVAIKRMKRKYYSWEEAMNL-REVKSLKKLSHPNIVKLKEVIREN- 72
            :|.|.:|.|........|.:||:|::...:.|...:..: ||:|.|....|.|::...::::.. 
  Fly    46 IGYGAFGVVWAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHENVLSALDILQPPH 110

  Fly    73 ----DTLYFVFEYMKENLYQMIKDRDTHLPEPELKSILFQVLTGLAFMHRHGFFHRDLKPENLLC 133
                ..:|.:.|.::.:|:::|.. ..||....:|..|:|:|.||.::|.....|||:||.|||.
  Fly   111 LDFFQEIYVITELLQSDLHKIIVS-PQHLSADHIKVFLYQILRGLKYLHSARILHRDIKPGNLLV 174

  Fly   134 SGPDLIKIADFGLAR--EIRSRPPFTDYVSTRWYRAPEVLLHSTNYGSTIDLWAMGCIMAELYTF 196
            :...::||.||||||  |.......|..|.|::|||||:|:.:.:|.|.:|:|::|||..||...
  Fly   175 NSNCVLKICDFGLARVEEPDQAKHMTQEVVTQYYRAPEILMGARHYSSAVDVWSVGCIFGELLGR 239

  Fly   197 RPLFPGSSEVDQLFKICSVLGTPDKDDWP---DGYRLASMIHFRYPDCIKVPLSSVVSRCSQNGL 258
            |.||...:.|.||..|..:||||..:|..   :|.|...:.....|....| |.::.|..:...:
  Fly   240 RILFQAQNPVQQLELITELLGTPTMEDMRHACEGARTHMLRRAPKPPSFSV-LYTLSSHATHEAV 303

  Fly   259 DLLEDMLAYDPDKRPTAQQSLKYPY-------FHALKRISPTAATKANVR-LNSKYAASNGHPVQ 315
            .||..||.:|||||.:...:|.:||       :|:. .......|.|.:| ..:.:..|.|.|..
  Fly   304 HLLCQMLVFDPDKRISVTDALAHPYLDEGRLRYHSC-MCKCCFTTSAGMRQYTADFEPSAGQPFD 367

  Fly   316 SVSNNVLPVQEKLQAVTELLHQ 337
            .:....|   ..:|.|.|.:|:
  Fly   368 DLWERKL---TSVQQVKEEMHK 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42366NP_723501.2 STKc_MAK_like 4..284 CDD:270824 93/291 (32%)
nmoNP_001356976.1 STKc_NLK 39..411 CDD:173748 105/347 (30%)

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