DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4598 and Echdc1

DIOPT Version :10

Sequence 1:NP_609322.1 Gene:CG4598 / 34315 FlyBaseID:FBgn0032160 Length:281 Species:Drosophila melanogaster
Sequence 2:XP_006227808.3 Gene:Echdc1 / 361465 RGDID:1359654 Length:466 Species:Rattus norvegicus


Alignment Length:266 Identity:69/266 - (25%)
Similarity:121/266 - (45%) Gaps:41/266 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 KTGIATLTMNRP-PVNGLNLELLQDLKSSIDEIES-NKSRGLILTSSSSTIFSAGLDILEMYKPD 95
            :.||..||:|.. .:|..:..::..|...:.|:|: .:.:|||:..:.:| |.:|.|:       
  Rat   220 QNGIGILTLNNSNKMNAFSGAMMLQLLERVIELENWTEGKGLIVHGAKNT-FCSGSDL------- 276

  Fly    96 KDRIRAFWTQLQDTWLALYGSSVPT---------AAAINGHSPAGGCLLATSCEYRVMVPNFTIG 151
             :.::|..|......|:::..:..|         .|.:.|.:..||..|.|:|::|:|.....|.
  Rat   277 -NAVKALSTPENGVALSMFMQNTLTRFMRLPLISVALVQGWAMGGGAELTTACDFRLMTEESVIR 340

  Fly   152 LNETQLGIVAPQWFMAS-FLSVLPQRIAERALNQGRMFTTEEALKVGLIDETANNKEE--AIEKC 213
            ....::||| |.|..|| .:.::..|.|.:.|:......::|||::||.||.....:|  |:|:.
  Rat   341 FVHKEMGIV-PSWGGASRLVEIIGSRQALKVLSGTFKLDSKEALRIGLADEVLQPSDEATALEQA 404

  Fly   214 VAFIGTFAKVNP--LARSLTKQQFRAADL---QQLQNGRKEDLEKFLFFVNQPAVQKGLGIYLEG 273
            ..::..|.. .|  :.|.|.|......:|   :.|||.|  |:.:.|:  ..||       .||.
  Rat   405 QEWLEQFVS-GPAQVIRGLKKSVCSGRELYLEEALQNER--DVLETLW--GGPA-------NLEA 457

  Fly   274 LKKKAK 279
            :.||.|
  Rat   458 IAKKGK 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4598NP_609322.1 crotonase-like 27..217 CDD:119339 50/197 (25%)
Echdc1XP_006227808.3 None

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