DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13123 and CG17801

DIOPT Version :10

Sequence 1:NP_609315.1 Gene:CG13123 / 34303 FlyBaseID:FBgn0032150 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_650660.2 Gene:CG17801 / 42144 FlyBaseID:FBgn0038550 Length:381 Species:Drosophila melanogaster


Alignment Length:378 Identity:80/378 - (21%)
Similarity:128/378 - (33%) Gaps:109/378 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LCRICF--VDSASVDIREHRSGGSSDQTVLQLIEAMFGWNIALNLTEELPM-ICNDCLEDCLQQY 67
            ||..||  ::...:...|          ||..|:.:.|  |.|...|..|. ||..||.|.....
  Fly    12 LCASCFCHLNPTIIFCLE----------VLAKIKDLTG--IWLEQNERQPRHICPSCLNDLNTSI 64

  Fly    68 AFFRKLTFANQQLLQLYNEAEVEM-----CQVKMDATEEEPENQASD-EFEILEEFRRIPLDYVV 126
                ||   .:::.:::|||.:..     ..::...::.|||..:|| |.|...:....|.|...
  Fly    65 ----KL---KKRIQRVHNEATLRRESGLDEDLESTVSDIEPEGDSSDLESEESYDSENYPFDKKA 122

  Fly   127 LDPDRPTETRQTRRRT------DSCT------------KPS---QRLANQ---------DSLIVS 161
            .:.|.........||.      ||.|            .||   :.|.|:         :.:.:.
  Fly   123 EESDIDLNLAHEDRRNEPHNPYDSETPLIFKHKNPLIETPSFANENLPNKVDAKSPKKGNFIQIG 187

  Fly   162 EFLPATTAQPRL-----------DLSDSQLEQLESPAYEMRT--------VDYAAVELKHYNLDE 207
            ..|...|..|.:           |::...:...:..|.:|::        |......||.:.:..
  Fly   188 TDLRLLTTYPSIKVVKPLALAPEDVAAENVPPAKRTARKMQSLVCPKCGRVFKTPYNLKTHMVRH 252

  Fly   208 YNEAN----------------RLLD-VEPSGSQAIYKCQYCPLAYASPQYLKTHVRNSHV----- 250
            ..|.|                ||.: |...|.|. ::|.:|...:.:.....:|.|..|:     
  Fly   253 TGEKNFPCTFCDKRFVTKYLARLHERVRHMGEQP-FECNFCSATFFTSTAKSSHERIRHIRDLRY 316

  Fly   251 -CKYCTTAFAKVRDLNEHIRQKHPH-----HQCVVCSNNFSTSSNLRAHLKKI 297
             |..||..|.....||:|   |..|     ..||:|..||:..:.||:|...:
  Fly   317 QCDQCTKRFNTKTCLNKH---KFLHSGLKPFDCVICQINFARKATLRSHFDSV 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13123NP_609315.1 zf-AD 6..82 CDD:471776 20/78 (26%)
PHA00733 175..272 CDD:177301 24/127 (19%)
C2H2 Zn finger 228..245 CDD:275368 2/16 (13%)
C2H2 Zn finger 251..272 CDD:275368 7/20 (35%)
KREPA <269..>303 CDD:483960 10/34 (29%)
C2H2 Zn finger 277..298 CDD:275368 8/21 (38%)
CG17801NP_650660.2 zf-AD 9..76 CDD:462262 20/82 (24%)
zf-C2H2 231..252 CDD:395048 3/20 (15%)
C2H2 Zn finger 232..252 CDD:275368 3/19 (16%)
zf-H2C2_2 244..269 CDD:463886 4/24 (17%)
C2H2 Zn finger 260..281 CDD:275368 3/20 (15%)
C2H2 Zn finger 289..308 CDD:275368 3/18 (17%)
C2H2 Zn finger 318..338 CDD:275368 8/22 (36%)
C2H2 Zn finger 346..362 CDD:275368 7/15 (47%)

Return to query results.
Submit another query.