DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13123 and ranshi

DIOPT Version :10

Sequence 1:NP_609315.1 Gene:CG13123 / 34303 FlyBaseID:FBgn0032150 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster


Alignment Length:348 Identity:76/348 - (21%)
Similarity:129/348 - (37%) Gaps:110/348 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KLCRICFVDS---ASVDIREHRSGGSSDQTVLQLIEAMFGWNIALNLTEELP-MICNDCLEDCLQ 65
            |:||.|...:   .|::|.|.|     :||.|:.|:.:.|  ..|.....|| .:|..| :.|||
  Fly     4 KVCRTCGKRTNAERSLNIFEKR-----NQTTLEHIKLLTG--AVLKNCSTLPNRLCASC-QTCLQ 60

  Fly    66 QYAFFRKLTF-ANQQLLQLYNEAE-VEMCQVKMDATEEEPE-----NQASDEFEILEEFRRIP-- 121
            |...||:... ..::||...::.: :.:||....:..|:.|     .:.|.|.|.|::....|  
  Fly    61 QAISFRERCLEVQRELLHSQDDEDFLRICQESPKSVLEQEELELDLAEISIEVERLDDLNEGPIQ 125

  Fly   122 ---------LDYVVLDPDRPTETRQTRRRTDSCTKPSQRLANQDSLIVSEFLPATTAQPRLDLSD 177
                     |:...::.|.|.                    |:|                 |:..
  Fly   126 SSGFKVEDILNESKINEDEPN--------------------NED-----------------DIDY 153

  Fly   178 SQLEQLESPAYEMRTVDYAAVEL--------KHYNLDEYNEANRLLDVEPSGSQ----------- 223
            |:::.|   .||..|...|..||        |..|.....::||....|..|:.           
  Fly   154 SEMDYL---IYESDTEVDAKQELKSDSENPKKRRNRRNPRDSNRTFFCEECGNHIKDRISFILHC 215

  Fly   224 ------AIYKCQYCPLAYASPQYLKTHVRNSHV------CKYCTTAFAKVRDLNEHIRQKHPHHQ 276
                  ..:.|::|...:.:|..||.|:| .|.      |::|:.:|:   |.:..::.:..|..
  Fly   216 KRHRGVKEFGCEFCEDRFCTPAELKRHIR-KHTGEKPFKCRHCSRSFS---DYSTRLKHERTHTN 276

  Fly   277 -----CVVCSNNFSTSSNLRAHL 294
                 |..|:|.|:||..|:.|:
  Fly   277 ERPFVCKECNNAFTTSYILKNHM 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13123NP_609315.1 zf-AD 6..82 CDD:471776 24/80 (30%)
PHA00733 175..272 CDD:177301 26/127 (20%)
C2H2 Zn finger 228..245 CDD:275368 5/16 (31%)
C2H2 Zn finger 251..272 CDD:275368 4/20 (20%)
KREPA <269..>303 CDD:483960 9/31 (29%)
C2H2 Zn finger 277..298 CDD:275368 8/18 (44%)
ranshiNP_649824.1 zf-AD 5..76 CDD:462262 23/78 (29%)
C2H2 Zn finger 198..218 CDD:275368 2/19 (11%)
COG5048 222..>276 CDD:227381 13/57 (23%)
C2H2 Zn finger 226..246 CDD:275368 7/20 (35%)
zf-H2C2_2 238..262 CDD:463886 7/24 (29%)
C2H2 Zn finger 254..274 CDD:275368 4/22 (18%)
C2H2 Zn finger 282..302 CDD:275368 8/18 (44%)
zf-H2C2_2 295..319 CDD:463886 2/5 (40%)
C2H2 Zn finger 310..328 CDD:275368
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.