DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13123 and nom

DIOPT Version :10

Sequence 1:NP_609315.1 Gene:CG13123 / 34303 FlyBaseID:FBgn0032150 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_649821.2 Gene:nom / 41038 FlyBaseID:FBgn0037617 Length:370 Species:Drosophila melanogaster


Alignment Length:343 Identity:87/343 - (25%)
Similarity:122/343 - (35%) Gaps:83/343 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LRKLCRICFVDSASVDIREHRSGGSSDQTVLQLIEAMFGWNIALNLTEELP----MICNDCLEDC 63
            |..:||:|..........|....|..|  :|:.|:.:.|     .|.:::|    |:|..|..| 
  Fly     2 LINVCRVCGRSRLCPKAVELFKPGRQD--ILRRIQLITG-----ILLQQIPNAPDMVCFCCQTD- 58

  Fly    64 LQQYAFFRKLTFANQQ----LLQLYNEAEVEMCQVKMDATEE---EPENQASDEFEILEEFR--- 118
            ||....||:.....|:    |||          ..|:.|:||   || |..|.:.:..:..|   
  Fly    59 LQSAMIFRRQCILQQKKWVPLLQ----------SDKVGASEEKKVEP-NDPSTKKKTTKRRRGRP 112

  Fly   119 RIPL---DYVVLDP--------------DRPTETRQTRRRTDSCTKPSQ-RLANQDSLIVSEFLP 165
            |:||   |.||.:.              |:|.|.......|||.....: .|.::|.|.....||
  Fly   113 RMPLEIVDIVVTNESKASAGESVGGDEFDQPVEISNEPDATDSDVNLEEIDLPDEDGLESDHDLP 177

  Fly   166 -------ATTAQPRLDLSDSQLEQLES------PAYEMRTVDYAAVELKHYNLDEYNEANRLLDV 217
                   .|....:.:.|.....|.|.      |..|.......|.|||.:||..:.       :
  Fly   178 NVQIHKCDTCGIIKNNKSSLVRHQFEHNGIRPYPCKECPKTFLVASELKAHNLTHHT-------L 235

  Fly   218 EPSGSQAIYKCQYCPLAYASPQYLKTHVR-----NSHVCKYCTTAFAKVRDLNEH--IRQKHPHH 275
            ||.     :.|:||...|.|....|.|.|     ...||..|..||.:...|..|  :.|....:
  Fly   236 EPP-----FACRYCDRRYFSVVGRKKHERVHTNERPFVCDQCGKAFTRTCILKAHMAVHQVVRKY 295

  Fly   276 QCVVCSNNFSTSSNLRAH 293
            .|.||..:||...:|..|
  Fly   296 SCDVCDRSFSLKKHLATH 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13123NP_609315.1 zf-AD 6..82 CDD:471776 21/83 (25%)
PHA00733 175..272 CDD:177301 29/109 (27%)
C2H2 Zn finger 228..245 CDD:275368 6/16 (38%)
C2H2 Zn finger 251..272 CDD:275368 7/22 (32%)
KREPA <269..>303 CDD:483960 8/25 (32%)
C2H2 Zn finger 277..298 CDD:275368 7/17 (41%)
nomNP_649821.2 zf-AD 5..76 CDD:214871 20/78 (26%)
C2H2 Zn finger 184..204 CDD:275368 3/19 (16%)
C2H2 Zn finger 212..261 CDD:275368 17/60 (28%)
C2H2 Zn finger 269..289 CDD:275368 6/19 (32%)
C2H2 Zn finger 297..313 CDD:275368 6/15 (40%)

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