DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13123 and Ovol1

DIOPT Version :10

Sequence 1:NP_609315.1 Gene:CG13123 / 34303 FlyBaseID:FBgn0032150 Length:323 Species:Drosophila melanogaster
Sequence 2:XP_008758360.3 Gene:Ovol1 / 309164 RGDID:1306956 Length:292 Species:Rattus norvegicus


Alignment Length:167 Identity:41/167 - (24%)
Similarity:66/167 - (39%) Gaps:46/167 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 ATTAQP-----RLDLSDSQLEQLESPAYEMRTVDYAAVELKHYNLDEYNEANRLLDVE------- 218
            |:.|:|     .||:|      |...:|.:.:......:|..      .:.|.|.|.:       
  Rat    74 ASVAEPPSCPLALDMS------LRDSSYGVASGPCEVAQLPP------EDVNHLTDPQSRDQGFL 126

  Fly   219 -----------PSGSQAIYKCQYCPLAYASPQYLKTHVR-----NSHVCKYCTTAFAKVRDLNEH 267
                       |:|.  ::.|..|..::...:.|..|::     ..|:|.||...|....||..|
  Rat   127 RTKMKVTLGDSPNGD--LFTCHICQKSFTYQRMLNRHMKCHNDVKRHLCTYCGKGFNDTFDLKRH 189

  Fly   268 IRQK---HPHHQCVVCSNNFSTSSNLRAHLKKIHGVQ 301
            :|..   .| ::|.:|...|:...:|.:|||||||||
  Rat   190 VRTHTGVRP-YKCSLCDKAFTQRCSLESHLKKIHGVQ 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13123NP_609315.1 zf-AD 6..82 CDD:471776
PHA00733 175..272 CDD:177301 22/122 (18%)
C2H2 Zn finger 228..245 CDD:275368 3/16 (19%)
C2H2 Zn finger 251..272 CDD:275368 8/23 (35%)
KREPA <269..>303 CDD:483960 15/36 (42%)
C2H2 Zn finger 277..298 CDD:275368 8/20 (40%)
Ovol1XP_008758360.3 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.