DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13123 and ovol1

DIOPT Version :10

Sequence 1:NP_609315.1 Gene:CG13123 / 34303 FlyBaseID:FBgn0032150 Length:323 Species:Drosophila melanogaster
Sequence 2:XP_004913743.1 Gene:ovol1 / 100495817 XenbaseID:XB-GENE-5964939 Length:247 Species:Xenopus tropicalis


Alignment Length:169 Identity:40/169 - (23%)
Similarity:68/169 - (40%) Gaps:45/169 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 KPSQRLANQDSLIVS-EFLPATTAQPRLDLSDSQLEQLESPAYEMRTVDYAAVELKHYNLDEYNE 210
            |....|.|:::|.:| ..|...:..|...:::.:.||  :|..:                     
 Frog    43 KAEPELDNEEALDLSLHHLRCVSNSPSCQVTEGRQEQ--APGTQ--------------------- 84

  Fly   211 ANRLLDVEP--SGSQ-AIYKCQYCPLAYASPQYLKTHVR-----NSHVCKYCTTAFAKVRDLNEH 267
                 |..|  .|.| .::.|..|..:::..:.|..|::     ..|.|::|...|....||..|
 Frog    85 -----DKVPMIQGEQRLLFHCALCEKSFSFQRMLNRHMKCHSEVKRHRCEHCGKGFNDTFDLKRH 144

  Fly   268 IRQKHPH-----HQCVVCSNNFSTSSNLRAHLKKIHGVQ 301
            :|   .|     ::|.:|...|:...:|.:|||||||||
 Frog   145 VR---THTGVRPYKCHLCEKAFTQRCSLESHLKKIHGVQ 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13123NP_609315.1 zf-AD 6..82 CDD:471776
PHA00733 175..272 CDD:177301 19/104 (18%)
C2H2 Zn finger 228..245 CDD:275368 3/16 (19%)
C2H2 Zn finger 251..272 CDD:275368 7/20 (35%)
KREPA <269..>303 CDD:483960 15/38 (39%)
C2H2 Zn finger 277..298 CDD:275368 8/20 (40%)
ovol1XP_004913743.1 COG5048 <45..186 CDD:227381 39/167 (23%)
C2H2 Zn finger 100..120 CDD:275368 4/19 (21%)
zf-H2C2_2 112..136 CDD:463886 5/23 (22%)
C2H2 Zn finger 128..148 CDD:275368 7/22 (32%)
zf-H2C2_2 140..165 CDD:463886 8/27 (30%)
C2H2 Zn finger 156..177 CDD:275368 8/20 (40%)
Blue background indicates that the domain is not in the aligned region.

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