DRSC/TRiP Functional Genomics Resources

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Protein Alignment zf30C and wor

DIOPT Version :10

Sequence 1:NP_477301.1 Gene:zf30C / 34292 FlyBaseID:FBgn0270924 Length:777 Species:Drosophila melanogaster
Sequence 2:NP_476601.1 Gene:wor / 34906 FlyBaseID:FBgn0001983 Length:548 Species:Drosophila melanogaster


Alignment Length:647 Identity:130/647 - (20%)
Similarity:211/647 - (32%) Gaps:214/647 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 PREESRPMECKCCYTRFSSASNLSKHRRSR-------------PDT------------CGQPEYD 164
            |..:..|.|.:   .||.:|.|.:|.:.:|             ||.            .|..|::
  Fly    55 PEPQPVPTELR---RRFDAAMNQTKEQLARRIWEETREIARAFPDVFTREEIAKSLARLGYGEFE 116

  Fly   165 SPGSSDGMKKHKAFRKKDRNRDSDDEDTTSEESEDSDDDIPLASRLKTKLKQESQNSDSGDECPD 229
            .|                      .|:...|...:.:..:||                       
  Fly   117 LP----------------------PEEEVMEPEPEPEQHLPL----------------------- 136

  Fly   230 FEPNNSEDDADASGFQLPPPAMVKVEAFDEEDFEYQDASMYVKTESTDIFSNEKDKLLDVLLNEG 294
                  ....|||      |.::|.|..|||.|.                          |.|..
  Fly   137 ------RYTRDAS------PTIIKAEPSDEEQFP--------------------------LRNYN 163

  Fly   295 DGLKPFESLKVEQGAGILDEIAAVPLVEVAE-EDVLELRGHQMEKPPGPRKRGRPPKEKIPVVKR 358
            :.|                      |..:|| ||.::::..:.|.||.|     .|:...|    
  Fly   164 NNL----------------------LKSIAEYEDCMKMQNIKEEIPPIP-----SPQLFYP---- 197

  Fly   359 KYRKRNAPRSP--SPDDSSGTPKRVAKISKKELKERLKMINKMEKSWKCPHCVKIYHIRKPYEKH 421
                   |.:|  .|:|.|.|.:||       |.|.:.:.|.........|... .|...|.:  
  Fly   198 -------PPTPLAEPEDLSVTQRRV-------LSENMNLQNVARALLSMQHMAP-QHAPPPID-- 245

  Fly   422 LRDDHKLNEAEMKEIFKDVDVHAKLDEEVFKCPICSKIYLVEKRLVTHMKVH------------- 473
            :.:|.:..:....:|....|::       ::|..|:|.|.....||.|.:.|             
  Fly   246 MEEDQENQDINQLKIKSSNDLY-------YQCQQCNKCYATYAGLVKHQQTHAYESTEYKIIRSQ 303

  Fly   474 -GEDGKLTFKCPCYCNLFFATKEQATEHARAQHKE------LLYCEKCDKYMTGHDSLKNHERNF 531
             |..|.:..:.. :|....:...||...|.||..:      ..:|:.|.|..:.:..|..|:: |
  Fly   304 PGGSGAIVDQTE-FCTDQASALIQAANVASAQSMQKPVGVPRYHCQDCGKSYSTYSGLSKHQQ-F 366

  Fly   532 HSKKEPRSQQRNLI-CDKCGKKFTGRTSLSDHVRSDCGRLPLYGCSVCGKHLSTAGILKTHMLLH 595
            |......:|.:.:. |..|.|.:....:|..|:|:.  .||. .|.:|||..|...:|:.|:..|
  Fly   367 HCPSAEGNQVKKVFSCKNCDKTYVSLGALKMHIRTH--TLPC-KCPICGKAFSRPWLLQGHIRTH 428

  Fly   596 KADTPYQCDKCGKTFKVKAQYKSHLKTRHTDYKPYKCHLCPKEYPYRESLLTHM-----TVHTGI 655
            ..:.|:.|..|.:.|..::..::|::| |:|.|.|.|..|.|.:.....|..|:     |..:|.
  Fly   429 TGEKPFSCQHCNRAFADRSNLRAHMQT-HSDVKKYSCPTCTKSFSRMSLLAKHLQSGCQTEQSGG 492

  Fly   656 KRFLCNNCGKRFTCISNLQAHRKVHADTCGQLPLNAKATQYMGVQRGKLLMGAKPEAGMEYE 717
            .    :..|..|. ...||.|.:|:.:  |..|........:|...|      :.|.|.||:
  Fly   493 P----SGSGGGFD-QQQLQQHLQVYEE--GHNPHQLYYAGSVGSSNG------EEEEGGEYQ 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zf30CNP_477301.1 C2H2 Zn finger 33..53 CDD:275368
C2H2 Zn finger 61..82 CDD:275368
C2H2 Zn finger 98..117 CDD:275368
C2H2 Zn finger 134..152 CDD:275368 5/17 (29%)
C2H2 Zn finger 511..532 CDD:275370 5/20 (25%)
COG5048 <523..>672 CDD:227381 40/154 (26%)
C2H2 Zn finger 546..566 CDD:275368 6/19 (32%)
C2H2 Zn finger 575..595 CDD:275368 7/19 (37%)
C2H2 Zn finger 603..624 CDD:275368 5/20 (25%)
C2H2 Zn finger 632..652 CDD:275368 6/24 (25%)
C2H2 Zn finger 660..680 CDD:275368 5/19 (26%)
worNP_476601.1 C2H2 Zn finger 270..290 CDD:275368 7/19 (37%)
C2H2 Zn finger 317..334 CDD:275368 4/16 (25%)
zf-C2H2 345..367 CDD:395048 5/22 (23%)
C2H2 Zn finger 347..367 CDD:275368 5/20 (25%)
zf-C2H2 380..402 CDD:395048 6/21 (29%)
C2H2 Zn finger 382..402 CDD:275368 6/19 (32%)
zf-C2H2 406..428 CDD:395048 7/22 (32%)
C2H2 Zn finger 408..428 CDD:275368 7/19 (37%)
zf-C2H2 434..456 CDD:395048 5/22 (23%)
C2H2 Zn finger 436..456 CDD:275368 5/20 (25%)
C2H2 Zn finger 464..481 CDD:275368 4/16 (25%)
Blue background indicates that the domain is not in the aligned region.

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