DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pka-C1 and AT2G20050

DIOPT Version :10

Sequence 1:NP_476977.1 Gene:Pka-C1 / 34284 FlyBaseID:FBgn0000273 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_179595.5 Gene:AT2G20050 / 816524 AraportID:AT2G20050 Length:1094 Species:Arabidopsis thaliana


Alignment Length:319 Identity:101/319 - (31%)
Similarity:158/319 - (49%) Gaps:19/319 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SNKKVDAAETVKEFLEQAKEEFEDKWRRNPTNT-----AALDDFERIKTLGTGSFGRVMIVQHKP 67
            :|...|..:|.....|.:||.      ...|:|     |.|.|.|....|.|.....:.:|..|.
plant   745 TNISDDGPKTRHSSFELSKES------AKVTDTTALAKATLADLEWTTCLSTTDCSEIGLVHLKD 803

  Fly    68 TKDYYAMKILDKQKVVKLKQVEHTLNEKRILQAIQFPFLV--SLRYHFKDNSNLYMVLEYVPGGE 130
            .::..::|...||||.||.:....|.|:.:::.:..|..:  .:.....|.:...::|.......
plant   804 KENLLSLKRFSKQKVKKLGKEAQVLKERNLMKNVIKPSAIVPEILCTCVDQTFAAILLNTTLACP 868

  Fly   131 MFSHLRKVGRFSEPHSRFYAAQIVLAFEYLHYLDLIYRDLKPENLLIDSQGYLKVTDFGFAKRVK 195
            :.|.|.  ....|...||....:|.|.|.:|..::::|...||.|::|..|||::.||.|||::.
plant   869 ISSLLH--SPLDESSVRFITGSLVSAIEDIHKNEILFRGSSPELLMLDQSGYLQIVDFRFAKKLS 931

  Fly   196 G-RTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLVYEMAAGYPPF--FADQPIQIYEKIVSGK 257
            | ||:|:||..:||||||:..||:..|.||||||||:|.|..|..||  :.:..:..::||..|:
plant   932 GERTFTICGNADYLAPEIVQGKGHGYAADWWALGVLIYYMLEGEMPFGSWRESELDTFQKIAKGQ 996

  Fly   258 VRFPSHFGSDLKDLLRNLLQVDLTKRYGNLKAGVNDIKNQKWFASTDWIAIFQKKIEAP 316
            :.||....|:.:||:..||:||...|:|: :.|...||...||....|.||..::.:.|
plant   997 LTFPRVLSSEAEDLITKLLEVDENLRFGS-QGGPESIKKHPWFNGLKWEAISNREFQVP 1054

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pka-C1NP_476977.1 STKc_PKA 44..333 CDD:271111 91/278 (33%)
AT2G20050NP_179595.5 PP2Cc 123..397 CDD:238083
CAP_ED 491..600 CDD:237999
CAP_ED 617..>714 CDD:237999
Protein Kinases, catalytic domain 797..1054 CDD:473864 86/259 (33%)
Blue background indicates that the domain is not in the aligned region.

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