DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pka-C1 and PRKCQ

DIOPT Version :10

Sequence 1:NP_476977.1 Gene:Pka-C1 / 34284 FlyBaseID:FBgn0000273 Length:353 Species:Drosophila melanogaster
Sequence 2:XP_005252553.1 Gene:PRKCQ / 5588 HGNCID:9410 Length:740 Species:Homo sapiens


Alignment Length:308 Identity:116/308 - (37%)
Similarity:177/308 - (57%) Gaps:9/308 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 LDDFERIKTLGTGSFGRVMIVQHKPTKDYYAMKILDKQKVVKLKQVEHTLNEKRILQ-AIQFPFL 106
            ::||...|.||.||||:|.:.:.|.|..::|:|.|.|..|:....||.|:.|||:|. |.:.|||
Human   411 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFL 475

  Fly   107 VSLRYHFKDNSNLYMVLEYVPGGEMFSHLRKVGRFSEPHSRFYAAQIVLAFEYLHYLDLIYRDLK 171
            ..:...|:...||:.|:||:.||::..|::...:|....:.||||:|:|..::||...::|||||
Human   476 THMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLK 540

  Fly   172 PENLLIDSQGYLKVTDFGFAKR---VKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLVYE 233
            .:|:|:|..|::|:.|||..|.   ...:|.|.||||:|:||||:|.:.||.:||||:.|||:||
Human   541 LDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYE 605

  Fly   234 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFGSDLKDLLRNLLQVDLTKRYGNLKAGVNDIKNQK 298
            |..|..||......:::..|......:|.....:.||||..|...:..||.|..    .||:...
Human   606 MLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVR----GDIRQHP 666

  Fly   299 WFASTDWIAIFQKKIEAPFIPRCKGPGDTSNFD-DYEEEALRISSTEK 345
            .|...:|..:.:|:|:.||.|:.|.|.|.|||| ::..|..|:|..::
Human   667 LFREINWEELERKEIDPPFRPKVKSPFDCSNFDKEFLNEKPRLSFADR 714

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pka-C1NP_476977.1 STKc_PKA 44..333 CDD:271111 113/293 (39%)
PRKCQXP_005252553.1 C1_nPKC_theta-like_rpt1 187..247 CDD:410384
C1_nPKC_theta-like_rpt2 266..315 CDD:410387
STKc_nPKC_theta 408..738 CDD:270770 116/308 (38%)
Blue background indicates that the domain is not in the aligned region.

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