DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pka-C1 and prkcaa

DIOPT Version :10

Sequence 1:NP_476977.1 Gene:Pka-C1 / 34284 FlyBaseID:FBgn0000273 Length:353 Species:Drosophila melanogaster
Sequence 2:XP_021332537.1 Gene:prkcaa / 497384 ZFINID:ZDB-GENE-050208-100 Length:679 Species:Danio rerio


Alignment Length:341 Identity:125/341 - (36%)
Similarity:195/341 - (57%) Gaps:24/341 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 ETVKEFLEQAKEEFEDKWRRNP--TNTAALD-----------------DFERIKTLGTGSFGRVM 61
            |..::|.::..|:.|...:..|  .|..|||                 ||..:..||.||||:||
Zfish   297 ELRQKFEDETLEDLEQIAKLGPPKKNITALDDSGSSITSSNVDNVRLSDFNFLAVLGKGSFGKVM 361

  Fly    62 IVQHKPTKDYYAMKILDKQKVVKLKQVEHTLNEKRIL-QAIQFPFLVSLRYHFKDNSNLYMVLEY 125
            :.:.|.:.:.:|:|||.|..|::...||.|:.|||:| |..:.|||..|...|:....||.|:||
Zfish   362 LAEMKSSDELFAIKILKKDVVIQDDDVECTMVEKRVLAQQDKPPFLTQLHSCFQTVDRLYFVMEY 426

  Fly   126 VPGGEMFSHLRKVGRFSEPHSRFYAAQIVLAFEYLHYLDLIYRDLKPENLLIDSQGYLKVTDFGF 190
            |.||::..|:::||:|.||.:.||||:|.:...:||...:||||||.:|:::|::|::|:.|||.
Zfish   427 VNGGDLMYHIQQVGKFKEPQAVFYAAEIAVGLFFLHKKGIIYRDLKLDNVMLDAEGHIKIADFGM 491

  Fly   191 AKR--VKG-RTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLVYEMAAGYPPFFADQPIQIYEK 252
            .|.  |:| .|.|.||||:|:|||||..:.|.::|||||.|||:|||.||.|||..:...::::.
Zfish   492 CKENIVEGVTTRTFCGTPDYIAPEIIAYQPYGRSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQS 556

  Fly   253 IVSGKVRFPSHFGSDLKDLLRNLLQVDLTKRYGNLKAGVNDIKNQKWFASTDWIAIFQKKIEAPF 317
            |:...|.:......:...:.:.|:....:||.|..:.|..||:...:|...||..:..::::.||
Zfish   557 IMEHNVSYSKTLSKEAVSICKGLMTKHPSKRLGCGQEGERDIREHAFFRRIDWDRLANREVQPPF 621

  Fly   318 IPRCKGPGDTSNFDDY 333
            .|:..|.| ..|||.:
Zfish   622 KPKVCGKG-AENFDKF 636

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pka-C1NP_476977.1 STKc_PKA 44..333 CDD:271111 117/309 (38%)
prkcaaXP_021332537.1 C1_cPKC_rpt1 33..90 CDD:410383
C1_cPKC_rpt2 100..153 CDD:410386
C2_PKC_alpha_gamma 157..287 CDD:175992
STKc_cPKC_alpha 335..675 CDD:270766 116/303 (38%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.