DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pka-C1 and trc

DIOPT Version :10

Sequence 1:NP_476977.1 Gene:Pka-C1 / 34284 FlyBaseID:FBgn0000273 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_001262071.1 Gene:trc / 40165 FlyBaseID:FBgn0003744 Length:463 Species:Drosophila melanogaster


Alignment Length:387 Identity:122/387 - (31%)
Similarity:204/387 - (52%) Gaps:55/387 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ATTSNKKVDAAETVKEFLEQAKEEFEDKWRRNPTNTAALDDFERIKTLGTGSFGRVMIVQHKPTK 69
            |...::.:..|:..::.|:.|::|.|  :.|.......::|||.:|.:|.|:||.|.:||.|.|.
  Fly    54 AQLKDESLSEAQRQEKRLQHAQKETE--YLRLKRLRLGVEDFEALKVIGRGAFGEVRLVQKKDTG 116

  Fly    70 DYYAMKILDKQKVVKLKQVEHTLNEKRILQAIQFPFLVSLRYHFKDNSNLYMVLEYVPGGEMFSH 134
            ..||||:|.|..:::.:||.|...|:.:|......::|.:.|.|:|..|||:::|::|||:|.:.
  Fly   117 HVYAMKVLRKADMLEKEQVAHVRAERDVLVEADHQWVVKMYYSFQDPVNLYLIMEFLPGGDMMTL 181

  Fly   135 LRKVGRFSEPHSRFYAAQIVLAFEYLHYLDLIYRDLKPENLLIDSQGYLKVTDFGFAKRVK---- 195
            |.|....||..::||.::..||.:.:|.|..|:||:||:|||:|::|:||::|||....:|    
  Fly   182 LMKKDTLSEEGTQFYISETALAIDSIHKLGFIHRDIKPDNLLLDARGHLKLSDFGLCTGLKKSHR 246

  Fly   196 --------------------------------GRTW---------TLCGTPEYLAPEIILSKGYN 219
                                            ..:|         :..|||:|:|||:.|..||.
  Fly   247 TDFYRDLSQAKPSDFIGTCASLSCSPMDSKRRAESWKRNRRALAYSTVGTPDYIAPEVFLQTGYG 311

  Fly   220 KAVDWWALGVLVYEMAAGYPPFFADQPIQIYEKIVSGK--VRFPSH--FGSDLKDLLRNLLQVDL 280
            .|.|||:|||::|||..|||||.:|.|...|.|:::.:  :.||..  ...:.|:.:.|.. .:.
  Fly   312 PACDWWSLGVIMYEMLMGYPPFCSDNPQDTYRKVMNWRETLIFPPEIPISEEAKETIINFC-CEA 375

  Fly   281 TKRYGNLKAGVNDIKNQKWFASTDWIAIFQKKIEAPFIPRCKGPGDTSNFDDYEEEALRISS 342
            .:|.|: :.|:.|:|:..:|...||..|.::....|.  ..:...||||||::.:.:|.|.|
  Fly   376 DRRLGS-QRGLEDLKSVPFFRGVDWEHIRERPAAIPV--EVRSIDDTSNFDEFPDVSLEIPS 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pka-C1NP_476977.1 STKc_PKA 44..333 CDD:271111 112/337 (33%)
trcNP_001262071.1 MobB_Trc-like 24..88 CDD:439274 7/35 (20%)
STKc_NDR_like 91..455 CDD:270750 115/348 (33%)

Return to query results.
Submit another query.