DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pka-C1 and Lats2

DIOPT Version :10

Sequence 1:NP_476977.1 Gene:Pka-C1 / 34284 FlyBaseID:FBgn0000273 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_001100737.1 Gene:Lats2 / 305922 RGDID:1305906 Length:1042 Species:Rattus norvegicus


Alignment Length:387 Identity:126/387 - (32%)
Similarity:192/387 - (49%) Gaps:70/387 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 KVDAAETVKEFLEQAKEEFEDKWRRNPTNTAALDD--FERIKTLGTGSFGRVMIVQHKPTKDYYA 73
            |....||.:|.:.:...:.|..:.|  ...|.:|.  |.:|||||.|:||.|.:.....|...||
  Rat   591 KAGLCETEQEQMRKILYQKESNYNR--LKRAKMDKSMFVKIKTLGIGAFGEVCLACKVDTHALYA 653

  Fly    74 MKILDKQKVVKLKQVEHTLNEKRILQAIQFPFLVSLRYHFKDNSNLYMVLEYVPGGEMFSHLRKV 138
            ||.|.|:.|:...||.|...|:.||......::|.|.|.|:|..:||.|::|:|||:|.|.|.::
  Rat   654 MKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDSLYFVMDYIPGGDMMSLLIRM 718

  Fly   139 GRFSEPHSRFYAAQIVLAFEYLHYLDLIYRDLKPENLLIDSQGYLKVTDFGFAKRVKGRTWT--- 200
            ..|.|..:|||.|::.||.|.:|.:..|:||:||:|:|||..|::|:||||..   .|..||   
  Rat   719 EVFPEHLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLC---TGFRWTHNS 780

  Fly   201 --------------------------------------------------LCGTPEYLAPEIILS 215
                                                              |.|||.|:|||::|.
  Rat   781 KYYQKGNHIRQDSMEPGDLWDDVSNCRCGDRLKTLEQRAQKQHQRCLAHSLVGTPNYIAPEVLLR 845

  Fly   216 KGYNKAVDWWALGVLVYEMAAGYPPFFADQPIQIYEKIVS--GKVRFPSH--FGSDLKDLLRNL- 275
            |||.:..|||::||:::||..|.|||.|..|.:...|:::  ..:..|:.  ..::.:||:..| 
  Rat   846 KGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPTQVKLSAEARDLITKLC 910

  Fly   276 LQVDLTKRYGNLKAGVNDIKNQKWFASTDWIAIFQKKIEAPFIPRCKGPGDTSNFDDYEEEA 337
            ...|.  |.|  :.|.:|:|...:|::.|:....:|: .||::|....|.||||||..:||:
  Rat   911 CAADC--RLG--RDGADDLKAHPFFSTIDFSRDIRKQ-PAPYVPTISHPMDTSNFDPVDEES 967

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pka-C1NP_476977.1 STKc_PKA 44..333 CDD:271111 117/348 (34%)
Lats2NP_001100737.1 UBA_LATS2 101..141 CDD:270581
PHA03247 <143..490 CDD:223021
MobB_LATS2 543..625 CDD:439272 8/35 (23%)
Protein Kinases, catalytic domain 624..1004 CDD:473864 118/352 (34%)
Blue background indicates that the domain is not in the aligned region.

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