DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pka-C1 and air-1

DIOPT Version :10

Sequence 1:NP_476977.1 Gene:Pka-C1 / 34284 FlyBaseID:FBgn0000273 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_505119.1 Gene:air-1 / 179202 WormBaseID:WBGene00000098 Length:326 Species:Caenorhabditis elegans


Alignment Length:309 Identity:97/309 - (31%)
Similarity:161/309 - (52%) Gaps:44/309 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 LEQAKEEFEDKWRRNPTNTAALDDFERIKTLGTGSFGRVMIVQHKPTKDYYAMKILDKQKVVKLK 86
            ::||:|  |..|        :||||:..:.||.|.||.|.|.:.|.||...|:|:|.|.::::| 
 Worm    30 VDQARE--ESCW--------SLDDFDVGRPLGKGKFGNVFISREKKTKRIIALKVLFKTQLLQL- 83

  Fly    87 QVEHTL-NEKRILQAIQFPFLVSLRYHFKDNSNLYMVLEYVPGGEMFSHLRKVGRFSEPHSRF-- 148
            .|.|.| .|..|...::.|.:::|..:|.|:..::::|:|...||:|:.|:     |:|..:.  
 Worm    84 GVSHQLKREIEIQYHLRHPNILTLYGYFHDDKRVFVILDYASRGELFNVLQ-----SQPGHKVNE 143

  Fly   149 -----YAAQIVLAFEYLHYLDLIYRDLKPENLLIDSQGYLKVTDFGF------AKRVKGRTWTLC 202
                 :..|:..|..|.|...:|:||:||||||:||:..||:.|||:      :||     .|||
 Worm   144 VIAGRFVRQLANALHYCHSKGVIHRDIKPENLLLDSKLNLKLADFGWSVVADHSKR-----HTLC 203

  Fly   203 GTPEYLAPEIILSKGYNKAVDWWALGVLVYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFGSD 267
            ||.:|||||::.::.::..||.||:|:|::||..||.||......::..:|...|:..||.....
 Worm   204 GTMDYLAPEMVSNQPHDFNVDIWAIGILLFEMLVGYAPFANQTGDKLIARIKECKIYIPSVVTDG 268

  Fly   268 LKDLLRNLLQVDLTKRYGNLKAGVNDIKNQKWFASTDWIAIFQKKIEAP 316
            ...|:..:::.:..:|     ..:.||....|......    ::.||.|
 Worm   269 AASLINAIIKKEPQER-----LPLVDIMAHPWIKEMKQ----REDIEVP 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pka-C1NP_476977.1 STKc_PKA 44..333 CDD:271111 91/287 (32%)
air-1NP_505119.1 STKc_Aurora 43..297 CDD:270909 87/269 (32%)

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