DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pka-C1 and rskn-1

DIOPT Version :10

Sequence 1:NP_476977.1 Gene:Pka-C1 / 34284 FlyBaseID:FBgn0000273 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_001122504.1 Gene:rskn-1 / 172647 WormBaseID:WBGene00011352 Length:804 Species:Caenorhabditis elegans


Alignment Length:170 Identity:39/170 - (22%)
Similarity:63/170 - (37%) Gaps:38/170 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 KQTVLANRRWVPPPGKGSLYLRPLLFGS-GASLGVAAASEYTFLVFGSPVQ-NYF---KEGTAAL 145
            |.|..:|..:|   .||:..||....|| ||:||:..          |.:| |:|   .:.|.:.
 Worm  1451 KVTAQSNNSYV---RKGNSLLRKPSHGSPGAALGIPP----------SAIQLNHFTVEDKSTGSS 1502

  Fly   146 NLYVEEVIPRAYLGGTGGVKAISNYGPVLEVMRRAKSRGFSDVLYLD----ADTGKNIEEVSAAN 206
            |:.           ......::...|.:..:.|::|....|....|.    ..:||.....|..:
 Worm  1503 NMV-----------DVDNASSLVKTGEIATLERQSKPPSDSSTSKLSNAIATSSGKCALSYSTDH 1556

  Fly   207 IFLVKGNTIVTPATSGTI----LGGITRKSIIEIALDLGY 242
            :......:|:..||||..    .||.|.|: .:..:..||
 Worm  1557 LTTGLPESIMDSATSGEANFPHSGGDTLKT-SDTLIQTGY 1595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pka-C1NP_476977.1 STKc_PKA 44..333 CDD:271111 39/170 (23%)
rskn-1NP_001122504.1 STKc_RSK_N 102..418 CDD:270734
STKc_RSK_C 447..744 CDD:270993
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.