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Protein Alignment Pka-C1 and Sgk2

DIOPT Version :10

Sequence 1:	NP_476977.1	Gene:	Pka-C1 / 34284	FlyBaseID:	FBgn0000273	Length:	353	Species:	Drosophila melanogaster
Sequence 2:	NP_604458.1	Gene:	Sgk2 / 171497	RGDID:	620232	Length:	367	Species:	Rattus norvegicus

Alignment Length:	332	Identity:	135/332 - (40%)
Similarity:	203/332 - (61%)	Gaps:	17/332 - (5%)

- Green bases have known domain annotations that are detailed below.

  Fly    36 NPTNTAALDDFERIKTLGTGSFGRVMIVQHKPTKDYYAMKILDKQKVVKLKQVEHTLNEKRI-LQ 99
            ||  .|...||:.:|.:|.|::|:|::.:.|....:||:|:|.|:.::|.|:..|.:.|:.: |:
  Rat    27 NP--NARPTDFDFLKVIGKGNYGKVLLAKRKSDGAFYAVKVLQKKSILKNKEQSHIMAERNVLLK 89

  Fly   100 AIQFPFLVSLRYHFKDNSNLYMVLEYVPGGEMFSHLRKVGRFSEPHSRFYAAQIVLAFEYLHYLD 164
            .::.||||.|||.|:....||.||:||.|||:|.||::..||.||.:|||.|::..|..|||.|:
  Rat    90 NVRHPFLVGLRYSFQTPEKLYFVLDYVNGGELFFHLQREHRFLEPRARFYTAEVASAIGYLHSLN 154

  Fly   165 LIYRDLKPENLLIDSQGYLKVTDFGFAKRV---KGRTWTLCGTPEYLAPEIILSKGYNKAVDWWA 226
            :|||||||||:|:|.||::.:||||..|..   :..|.|.||||||||||::..:.|::|||||.
  Rat   155 IIYRDLKPENILLDCQGHVVLTDFGLCKECVEPEETTSTFCGTPEYLAPEVLRKEPYDRAVDWWC 219

  Fly   227 LGVLVYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFGSDLKDLLRNLLQVDLTKRYGNLKAGV 291
            ||.::|||..|.||||.....|:||.|:...::.|........|||:.||..|..:|.|: |...
  Rat   220 LGAVLYEMLHGLPPFFNTDVAQMYENILHQPLQIPGGRTVAACDLLQGLLHKDQRQRLGS-KEDF 283

  Fly   292 NDIKNQKWFASTDWIAIFQKKIEAPFIPRCKGPGDTSNFD-DYEEEAL---------RISSTEKC 346
            .||||..:|:..:|..::.|::..||.|..:||.|..:|| ::.:||:         .:||:...
  Rat   284 LDIKNHMFFSPINWDDLYHKRLTPPFNPNVEGPADLKHFDPEFTQEAVSKSIGCTPDTMSSSSGA 348

  Fly   347 AKEFAEF 353
            :..|..|
  Rat   349 SSAFLGF 355

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.