DRSC/TRiP Functional Genomics Resources

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Protein Alignment Apoltp and vtg8

DIOPT Version :10

Sequence 1:NP_995670.2 Gene:Apoltp / 34283 FlyBaseID:FBgn0032136 Length:4333 Species:Drosophila melanogaster
Sequence 2:XP_073793807.1 Gene:vtg8 / 560066 ZFINID:ZDB-GENE-091106-1 Length:1528 Species:Danio rerio


Alignment Length:1825 Identity:334/1825 - (18%)
Similarity:630/1825 - (34%) Gaps:591/1825 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 GEQLYKYQYTVAVRTEF-------AGSGDNSSDLLLKSDLEIFFPKPCEGYLRINDAKLYDTLDE 105
            |.|.|.|:|...:.:..       ||...||..|:..:|..||.       |::::.:|::    
Zfish    32 GPQTYVYRYEALLFSGLHQKDLARAGIKINSKVLISAADDNIFL-------LKLSNPQLFE---- 85

  Fly   106 LNDNESDSSEKTKEYDYYDNLANEESESQNYDNMHPK----SSDFNVDLTKNL---LRFAFHDGL 163
                                          |..:.|:    :|.|.::|...|   ::|.:.:|:
Zfish    86 ------------------------------YSGIWPEDTFVTSKFTLELAAQLQIPIKFEYTNGM 120

  Fly   164 ISEVCPQEQETPWVLNIKKGILSAFQNTMMRFDVDANTTETDVSGQCQVQYAL-EDTDSSYVTIR 227
            :.::.........::|:.:|||:.||..:.:........|..:.|.|:.||.: ||.::::.||.
Zfish   121 VGKLFIPSLVPTIIINLYRGILNIFQLNLKKTQNVYEIQEDGIQGICKTQYVISEDEENNHTTII 185

  Fly   228 KTKDINSCRQRYATHSVLQTTPYTFRDDKTIWPILKSQSHCNLTIDNNVYKEI------KCLE-- 284
            |:||:.||.:|                                     :.|::      ||:|  
Zfish   186 KSKDLTSCHKR-------------------------------------IMKDVGLSYLEKCIECQ 213

  Fly   285 ------------THLLVPFSNASSGALTTSTSRLKLDGVESYSAGEFLEQNPELVERRATLVFDH 337
                        :::|.|..|..  .:|.:|.|........|..|:...     :|.|.||.|..
Zfish   214 QKIKSYSGAVTYSYILKPAPNGV--MITEATVREIHQFTPQYEIGDATH-----METRQTLTFLE 271

  Fly   338 ---TPAVKPSHD-------EIKAARELL---VEMCRVGFPNIQREFIDVFTNFLQTSK-----SL 384
               |..:..|.|       :.:.:.|.|   :::.::.  :.|.:.:|...| |.|.|     .:
Zfish   272 IMTTDIIPISADYLARGTLQYEFSTETLWSPIQLMKIS--DAQAQILDALNN-LATKKKEVHEDV 333

  Fly   385 DYKTLSVL-LQRSAS------------TCEQGRNHLLESLPFIGSTASYKVMRDQIINEKLT-KQ 435
            ..|.:.|: |.|.||            |....|..:|:::|.:|:.|:.|.::...:..:|: .:
Zfish   334 PLKFIHVIQLMRFASVDAVEGIWSQFKTRPNFRKWILDAIPAVGTLAALKFIKKTFLAGELSFSE 398

  Fly   436 MAHDWMTALSFITRPDEETLETFHSILEYAK---------------NRLDAEYTLGATAVVHSFC 485
            .....:.|:..:| .:.::::.:.|:..:.|               ..:.|.|..||........
Zfish   399 FTQVLLVAVHMVT-ANLDSIKMYSSLALHHKVQETPVLREIAMLGYGTMIARYCSGALECPVELL 462

  Fly   486 KH-HEACEENLRVQQIINLLETEFLNLYNLFKGERRTRERMVILLKGLGNIGVVSSAFAEQLQWI 549
            || ||..   .:|....::.|                   :.::||.|||     :|....:::|
Zfish   463 KHIHEIA---TKVSAKADIAE-------------------ITLILKVLGN-----AAHPASIKYI 500

  Fly   550 IR--------EDEAPVDIRLHGIL---AFRRVDCARHRSYFLDNYGNYTLNSELRIYSYLQAMRC 603
            .:        ..:.|:.:::..||   |..:.:..:..:..|..:.|..|:.|||:.|::.....
Zfish   501 TKFLPIFGTHIHQFPMRVQVDAILTLKALAKKESKQVLNVVLQLFLNKDLHPELRMLSWIVIFET 565

  Fly   604 PDYISVGVIKSI---LEHEEINQVGSFVWSHLTNLAKSNSP----------VRIEAQGLLLNDEL 655
            ..  |:|::.::   |..|:..||.||.:||:..||:|.:|          |.|:    :|:.:|
Zfish   566 KP--SMGLVITLARGLRSEKNLQVSSFAYSHMKALARSTAPDFALIAIACNVAIK----ILSPKL 624

  Fly   656 SERFKMDIRKFSRNYEHSLFFDEYNF----GTTTDANVIFGTDSYLPRIASVNFTADLFGQSVNF 716
            .        |.|..|..:...|.|.:    |....|..|....:.|||:......|.|.|.:.:.
Zfish   625 D--------KLSFLYSKAFLLDGYTYPLMDGAAASAFFINDATTILPRVVVAKVHAYLAGAAADV 681

  Fly   717 FEFTARAEGLEELAANAFGPKGPLSGQLLRKKLSFLNRWLGNESAEEDDTLENLLSLDNLRLKRK 781
            ||...|.:|::|:              ||  |..|||.       :...|:..|.          
Zfish   682 FEVGIRTDGIQEV--------------LL--KSPFLNE-------DGQPTIRQLF---------- 713

  Fly   782 AQEQARASEEEVDEDYDFEESLEGNKRQKRDVSTTRKQEIDRNVDSLGYKLKYDYNNPRAQFGLR 846
                               ::|:..|      :.::||.|                   ....::
Zfish   714 -------------------QALKSFK------TLSKKQHI-------------------GSIYIK 734

  Fly   847 VFGNDLRYFNVESLVEVMALAAKFNP-------FQQA-KNVLSGKEFTYTKSRVFLDASYTVPLA 903
            :||.::.:.||:.  .|:..|.:|..       .::| |.:.:|..|.|.|..:..:..:..|.|
Zfish   735 LFGQEIAFANVDK--AVLEQAIQFTTEGHMVELIEEALKKMQNGIVFQYAKPLLMGEVRHIFPSA 797

  Fly   904 VGLPLAIHAFGASSIDLRVSGNLDE---MDPP------------TDWHFDVEGQFKPSVSVDVIT 953
            .|:|:.:..:.|:.    |:|||:.   :.||            ||  ..|..:..||:::....
Zfish   798 AGVPMELSLYAAAV----VAGNLNVQAIITPPLTELTSVAHLMKTD--VKVTAEISPSIALQAFA 856

  Fly   954 TMQTDMFWEQSGIKVKSNLYSNSELVAKLKVRGRNLVSFSFDLPRD--KNEIFSVRSEL-LVQKR 1015
            ....:..:.|:....:..:::    :..|||.|:      ||:...  |.:.|.:...: .|...
Zfish   857 VAGINTGFIQAASIARGKIHT----LMPLKVVGK------FDITHANFKLQTFPIAFPVHAVTAH 911

  Fly  1016 EEQLPQAGIANRSANSTCTWPVLDQAIGLQMCSHYSVPDLSNATEIYPSLLLAGPLNFSLILKK- 1079
            .|.|..||.. ...|:....|.|.:.:.:|           ::.....|::..|.|:...::.. 
Zfish   912 FETLSAAGNI-EDVNAQIIKPTLPKMVVVQ-----------SSQNTLTSIISPGALSSEPVMPPV 964

  Fly  1080 SDLSAKKYVFEYKWDQQEEDNNFSLVFTTPGSKVPRVLVANVTKVPDAFNASVAFVN-------- 1136
            .|...:..|..:|               |..|.:|.:.:....:|   .:.:.||:.        
Zfish   965 KDPELRSIVPVHK---------------TLCSVIPHIGIKTCMEV---LSCNAAFIKNTTLYNMI 1011

  Fly  1137 GPNRVSAGCSYDGNPDFRRLDIYLDTNGNRSLDLGMELRRHQDFTAWIYNPRMLLAINGVNI-TG 1200
            |.:.:....:....|....|::        .:.||....:           ::|..||.|.: |.
Zfish  1012 GQHGMHINIARADGPAVEGLEL--------EVQLGARAAK-----------KLLKEINNVYLKTP 1057

  Fly  1201 LAGTV--KVNE-KNGIKQHDVDLSFETKKLQAVIKGNVVQSEITTSTNMTIKYRFQANKIEE--- 1259
            ...|:  |:.| ..|.|:......|..||:|.....:......::|.:.:|.:..:...:.:   
Zfish  1058 KIKTILQKLREILEGRKRDKSSRFFNHKKIQIAPSSSRRSFSSSSSVHDSISHLSETRSLVDSVP 1122

  Fly  1260 --INFAGKLVNNGDK----SKTEY--RGNMKLQTSAYPKLNFASESTWLSLQGHTEGMITYNNAP 1316
              :...|::|....|    ..|.|  |.|.::|...   ::.|::..|                 
Zfish  1123 PVVAIIGRVVRVDHKLLGYQLTAYVDRPNSRVQMIV---VSIAAKDNW----------------- 1167

  Fly  1317 DYVNPNYTSLVRLIFARSHSEDSFLDGTQT---RASLELKLPRSKIDYRILVKHKEHIKNGTEH- 1377
                             ....|:.|...||   :.:...:.|:..|.          ||.||.| 
Zfish  1168 -----------------KMCADAVLMSKQTIVAKMAWGAESPKYAIT----------IKGGTGHH 1205

  Fly  1378 --NVIVGLKYTPEKEITGLFSVHLPRRNLFAIDAYMNVTVPEFNSCTASLKVNEKATKDYIIFIN 1440
              :.:|.||...||                         ||.|      :....|:...||....
Zfish  1206 GPSPMVYLKVKCEK-------------------------VPRF------ITAYSKSVAGYIPGAA 1239

  Fly  1441 GSWFTGHSVAVKANYKDRSS---RVQALHHLKMIVESPSFNITSLNIIYRRKQLLIFYDIQAKYD 1502
            |  .||.:::.:.|.:.:..   .||.|..|.:|:::|...::..|::     |.|....:| |.
Zfish  1240 G--MTGLTISNEKNIERQIELIILVQDLRTLDIIIKTPLMTLSKTNLV-----LPIALPFEA-YQ 1296

  Fly  1503 QDPYGLTIQ----YASNA------------HNRNTNAEVRL---KVKERDYWINAK--LLSEQPK 1546
            :|.....||    .||:|            ::|..|.|:.|   :|..:|.....|  :|.::..
Zfish  1297 EDNVIKMIQNLYKEASSAKCSKVRSILTTFNHRTYNCEIPLSFYQVLVQDCTSEHKFLILMKKDD 1361

  Fly  1547 LLQLEIHMDKIRDVHIQVGLLNVDKRKELSLELKWDANRDPSQRLGLLAEYNSPGTKHYDGNLMI 1611
            :.:.|:...|:.|:.:|  |...|...::.:.                      ||:.....:..
Zfish  1362 VYKHEVLSIKVADIAVQ--LYQQDSVIKVRIN----------------------GTEVTTNKIPY 1402

  Fly  1612 TYPERTIHFGFNSFTGGPKYFGKVHASWSINEVI----EFE-YEAGILPGHT------LHNWVKA 1665
            .:|..|||  ......|..::...|   .:|||.    ::| |....:.|.|      ....:|.
Zfish  1403 HHPTGTIH--IEKKGAGIAFYAPGH---GLNEVYYAADQWEIYVGDRMKGQTRGICEKADGEIKQ 1462

  Fly  1666 ELRTP 1670
            |.|.|
Zfish  1463 EYRRP 1467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ApoltpNP_995670.2 LPD_N 49..633 CDD:214755 127/680 (19%)
Vit_open_b-sht 665..1005 CDD:462702 69/368 (19%)
DUF1081 1027..>1116 CDD:461916 13/89 (15%)
VWD 3741..3908 CDD:214566
C8 3952..4014 CDD:214843
vtg8XP_073793807.1 None
Blue background indicates that the domain is not in the aligned region.

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